PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022139712.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 356aa MW: 39194.9 Da PI: 8.244

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022139712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.8	1.5e-55	18	146	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s XP_022139712.1 18 LPPGFRFHPTDEELITYYLLKKVLDSTFTG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSV 111 79***********************999.89***********99999************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_022139712.1 112 kTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 146 45677**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MDYNLTSFSA AAAVDTNLPP GFRFHPTDEE LITYYLLKKV LDSTFTGRAI AEVDLNKCEP 60 WELPEKAKMG EKEWYFFSLR DRKYPTGLRT NRATEAGYWK ATGKDREIYS VKTCSLVGMK 120 KTLVFYRGRA PKGEKSNWVM HEYRLEGKFA YHYLSRSSKD EWVISRVFQK SGSGGGGSGN 180 GGSKKPRFLA GSINVYPEPS SPSSVSVSLP PLLDSSLYSA PATATAGSCN VTDRDSCSYN 240 SPTTREHVSC FSTANGSSSS SFNIPSYDFS TPPPLLAGDP SARFPRNIGL SAFPSLRSLQ 300 ENLQLPFFYS PVNVPSPPPP PHGNICSSTD AATGNWAVSD EPRSMNSTEL DCMWTY

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MDYNLTSFSA AAAVDTNLPP GFRFHPTDEE LITYYLLKKV LDSTFTGRAI AEVDLNKCEP  60
WELPEKAKMG EKEWYFFSLR DRKYPTGLRT NRATEAGYWK ATGKDREIYS VKTCSLVGMK  120
KTLVFYRGRA PKGEKSNWVM HEYRLEGKFA YHYLSRSSKD EWVISRVFQK SGSGGGGSGN  180
GGSKKPRFLA GSINVYPEPS SPSSVSVSLP PLLDSSLYSA PATATAGSCN VTDRDSCSYN  240
SPTTREHVSC FSTANGSSSS SFNIPSYDFS TPPPLLAGDP SARFPRNIGL SAFPSLRSLQ  300
ENLQLPFFYS PVNVPSPPPP PHGNICSSTD AATGNWAVSD EPRSMNSTEL DCMWTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-102	NAC family protein