PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139711.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 235aa    MW: 25951.5 Da    PI: 8.4656
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139711.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48e-1179126454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ +++L
  XP_022139711.1  79 SKACREKLRRDRLNDRFLELGSILDPG---RPPKTDKAAILVDAVRMVNQL 126
                     6789**********************8...89***************9999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVSPENPNWL FDYGLIDNIP VPDANFPVTS SSFSWAVQPL NGTPDVGVEI DGSLAEPDGR  60
LESGSKKRVR SDSFSASSSK ACREKLRRDR LNDRFLELGS ILDPGRPPKT DKAAILVDAV  120
RMVNQLRGEA QKLKESNSSL QEKIKELKTE KNELRDEKQR LKADKEKLEQ QVKSMHAQPG  180
FLPPAIPTFA AAQSQAPGNK LVPFIGYHPG VAMWQFMPPA AVDTSQDHVL RPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-104bHLH family protein