PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022139263.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 1685aa MW: 184224 Da PI: 6.4191

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022139263.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.7	3.2e-09	1011	1051	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT eE ++ +av +G++ ++ I+r++ +++ qck ++ XP_022139263.1 1011 NWTDEEKSIFMKAVSSHGKD-FDIISRCVR-SKSRDQCKVFFS 1051 8***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1685 aa Download sequence
MPPEPLPWDR KDLFKERKHE KSEALGSAAR WRDSYHGSRE FNRWGSSDFR RPTSHGKQGG 60 WHQFSEDSSH GYGPSRSFSD KMLEDESFRP SVPRGEGKYI RIGRESRGSF SHRDWRSHSR 120 ETNNEFTNPS RRPSQDVSSD QRSVDDTVTY SSPQSDIMNA SDQIHSKDRN EKVGGVCGLE 180 NGPRSDVEIS LSSTEWKPLK WSRSGSLSSR GSAYSSSTNA KNEKADLPLR IASPIESPSA 240 EATACVTSSL PFEETVSRKK PRLGWGDGLA KYEKEKVEVP DNSMRKEGAL LSSSSAELTH 300 SLGSSFTEKS PKTLAFSDCA SPATPSSFAC SSSSGLEEKP FNKTASVDNS TGIICSSPGP 360 GSQNQLQKFL FSLEKVEISS VANLGSSLVE LFHSDDPSSV ESCFGRSTLN KLLAYKSEIS 420 KTLEMTESEI DLLENELKSL KSENGGNVSH PKSCSGMHLV ESAIYSKERD GVSSIPPRPA 480 PLEIVSSSDA TVEKMPVCKG DMAVEDVDGK DAEIDSPGTV TSKFNEPHRV VKDVGSNLLE 540 TDHCREVTDA VLPDKMERQL PVYGPFVVDE HKTVGFGNKR SLEKSCTGEF IYGDLTARAD 600 NGSSISDLIF ACNKKHASKA AEAIFKELPT EKCKISSQST KIVSCSESEK LLKEKFAMRR 660 QFLKFEESVL TLKFKALQHS WKEKLLHSVK KCRSRPQKKE LSLRVTLSGY QKYRSSVRSR 720 FVLPGACQKP APTKDTLSYY SKLLLNPRVR LYRNILKMPA LILDKKEKLA LRFISHNGLV 780 EDPLAVEKER NMINPWTPAE RDIFWEKLSL FGKDFKKISS FLDLKTTADC VEFYYKNHKS 840 DSFKKSKNLE LGKQGKSSTT TYLVTSGKKW NPDMNATSLD MLGVASVMAA QADNIENQQK 900 CSRRSAMGGS VESKVSWSAD CIPANKNNFD ALQTEKETVA ADVLAGICGS LSSEAISSCI 960 TSAIDPNEDY RQRKCHKMES AVKLPSTSDI MQKTDNEPCS DDSSGDVDST NWTDEEKSIF 1020 MKAVSSHGKD FDIISRCVRS KSRDQCKVFF SKARKCLGLD LMHSSGDVGT PGSDNDASGT 1080 DTEDHCVVET CGARSSDEVG SKSADGLSTS DNINREESVS AVIANIQTSS EVVESTALHQ 1140 SNGEGVEAVG NSVCDAFEEE DVPNLDSDPV CSLINAVASS SHPVHDYKIE DFADNTEAGS 1200 NHSNEPDVLK SESAVSIGDE SSAAVSENRA TAKLAFGGEE KATNTNSRGQ SILQCSVQDS 1260 TGLVSNIALD GRSLGLDPQI SRPNILKVDS LEKSCTKSGE SSPVGRNSDH GVIKVEPTPD 1320 QDLLSSNLVL QEVRDAPQKP MKSDEYAEPQ NSLLHHAESS EFPCSYPFNK PIIEDINRNI 1380 NHTYFPGVQG LSKPDISCNS TYAPEDFYLQ NCSSSKLRHP VAELPFLRQN VEPGHDHQKN 1440 GSHSGSASDS DVPRRKGDVK LFGQILSHAP SQSNSTPCSS EHGEKKGPHK SSSKSYDMEE 1500 NILLRSYGFW DGNRIQTGLS ALPDSAILQA KYPAAFSGYY SAASAKTEQQ PLQALSNSGD 1560 RSLNGVVSAF PTKDGVVDYQ SYRSRDAAKM RPFPVDIFSE MHRRNGLDAL SLASLQQQGR 1620 MLVGMNVVGR GGILMGSSCT GVSDPVAAIK MHYAKAEQYV GQPGSTLTRE DGSWRGGNNG 1680 DLGSR

Sequence ? help Back to Top

Protein Sequence Length: 1685 aa Download sequence

MPPEPLPWDR KDLFKERKHE KSEALGSAAR WRDSYHGSRE FNRWGSSDFR RPTSHGKQGG  60
WHQFSEDSSH GYGPSRSFSD KMLEDESFRP SVPRGEGKYI RIGRESRGSF SHRDWRSHSR  120
ETNNEFTNPS RRPSQDVSSD QRSVDDTVTY SSPQSDIMNA SDQIHSKDRN EKVGGVCGLE  180
NGPRSDVEIS LSSTEWKPLK WSRSGSLSSR GSAYSSSTNA KNEKADLPLR IASPIESPSA  240
EATACVTSSL PFEETVSRKK PRLGWGDGLA KYEKEKVEVP DNSMRKEGAL LSSSSAELTH  300
SLGSSFTEKS PKTLAFSDCA SPATPSSFAC SSSSGLEEKP FNKTASVDNS TGIICSSPGP  360
GSQNQLQKFL FSLEKVEISS VANLGSSLVE LFHSDDPSSV ESCFGRSTLN KLLAYKSEIS  420
KTLEMTESEI DLLENELKSL KSENGGNVSH PKSCSGMHLV ESAIYSKERD GVSSIPPRPA  480
PLEIVSSSDA TVEKMPVCKG DMAVEDVDGK DAEIDSPGTV TSKFNEPHRV VKDVGSNLLE  540
TDHCREVTDA VLPDKMERQL PVYGPFVVDE HKTVGFGNKR SLEKSCTGEF IYGDLTARAD  600
NGSSISDLIF ACNKKHASKA AEAIFKELPT EKCKISSQST KIVSCSESEK LLKEKFAMRR  660
QFLKFEESVL TLKFKALQHS WKEKLLHSVK KCRSRPQKKE LSLRVTLSGY QKYRSSVRSR  720
FVLPGACQKP APTKDTLSYY SKLLLNPRVR LYRNILKMPA LILDKKEKLA LRFISHNGLV  780
EDPLAVEKER NMINPWTPAE RDIFWEKLSL FGKDFKKISS FLDLKTTADC VEFYYKNHKS  840
DSFKKSKNLE LGKQGKSSTT TYLVTSGKKW NPDMNATSLD MLGVASVMAA QADNIENQQK  900
CSRRSAMGGS VESKVSWSAD CIPANKNNFD ALQTEKETVA ADVLAGICGS LSSEAISSCI  960
TSAIDPNEDY RQRKCHKMES AVKLPSTSDI MQKTDNEPCS DDSSGDVDST NWTDEEKSIF  1020
MKAVSSHGKD FDIISRCVRS KSRDQCKVFF SKARKCLGLD LMHSSGDVGT PGSDNDASGT  1080
DTEDHCVVET CGARSSDEVG SKSADGLSTS DNINREESVS AVIANIQTSS EVVESTALHQ  1140
SNGEGVEAVG NSVCDAFEEE DVPNLDSDPV CSLINAVASS SHPVHDYKIE DFADNTEAGS  1200
NHSNEPDVLK SESAVSIGDE SSAAVSENRA TAKLAFGGEE KATNTNSRGQ SILQCSVQDS  1260
TGLVSNIALD GRSLGLDPQI SRPNILKVDS LEKSCTKSGE SSPVGRNSDH GVIKVEPTPD  1320
QDLLSSNLVL QEVRDAPQKP MKSDEYAEPQ NSLLHHAESS EFPCSYPFNK PIIEDINRNI  1380
NHTYFPGVQG LSKPDISCNS TYAPEDFYLQ NCSSSKLRHP VAELPFLRQN VEPGHDHQKN  1440
GSHSGSASDS DVPRRKGDVK LFGQILSHAP SQSNSTPCSS EHGEKKGPHK SSSKSYDMEE  1500
NILLRSYGFW DGNRIQTGLS ALPDSAILQA KYPAAFSGYY SAASAKTEQQ PLQALSNSGD  1560
RSLNGVVSAF PTKDGVVDYQ SYRSRDAAKM RPFPVDIFSE MHRRNGLDAL SLASLQQQGR  1620
MLVGMNVVGR GGILMGSSCT GVSDPVAAIK MHYAKAEQYV GQPGSTLTRE DGSWRGGNNG  1680
DLGSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-128	MYB family protein