PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139248.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 464aa    MW: 52269.9 Da    PI: 5.2521
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS447.31e-136454581373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA+ v+ g+ e+a+  L+++s+laspdgd+mqR+aayfteALa r+++s+++l kal++++    ++ ee+ a++lf+e++P+lk+++
  XP_022139248.1  45 LIHLLLACANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTKIL--SVPEEILAQRLFFELCPFLKLAY 137
                     689*************************************************************988887..59********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI ea++ge+++HiiDf   +++QW++Llq+L +Rp+gpp+lRiTg+++    +ke le+++ rL++ Ae+ ++pf+f++ v+++le+l+
  XP_022139248.1 138 VITNQAIIEAMDGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHLRITGIHE----QKEVLEQMALRLTEEAEKWDIPFQFTP-VVSKLENLD 227
                     ******************************************************....9**************************.799****** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll................................................desvsleserdevLklvkslsPk 237
                     le+Lrvk+gEalaV+++l+lh++l                                                 + ++ +++ +++L  +++lsPk
  XP_022139248.1 228 LESLRVKTGEALAVSSILELHSILatdddkktspsasnnlqkllrmkqrtlgewletdslqftspdstsvssPSGLNPSQKMNTFLTSLWGLSPK 322
                     ******************************************************************999876233333336788*********** PP

            GRAS 238 vvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332
                     vvv++eqe+++n++ F+er+leal++y+alfd+le+++ r s er+ vE++llg+ei+n++acegaer+erhe+lekW  rle++GF+ v++s++
  XP_022139248.1 323 VVVITEQESNLNGSAFMERVLEALNFYAALFDCLESTVTRSSIERQRVEKMLLGEEIKNIIACEGAERKERHEKLEKWILRLESVGFGRVQMSYH 417
                     *********************************************************************************************** PP

            GRAS 333 aakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      +   ++ll+ ++ dgy+v+e++g l+++W+drpL+svSaW
  XP_022139248.1 418 SMLLGSRLLQSYGYDGYKVKEDNGFLFICWQDRPLFSVSAW 458
                     ***************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MFNGEGSSSV TSSPLQLFPW SLSPGLGSPY PFLRELKSEE RGLCLIHLLL ACANQVAIGN  60
IENANVGLEQ ISHLASPDGD TMQRIAAYFT EALADRILKS WPGLHKALNS TKILSVPEEI  120
LAQRLFFELC PFLKLAYVIT NQAIIEAMDG ERMIHIIDFK SCEPAQWINL LQTLKDRPDG  180
PPHLRITGIH EQKEVLEQMA LRLTEEAEKW DIPFQFTPVV SKLENLDLES LRVKTGEALA  240
VSSILELHSI LATDDDKKTS PSASNNLQKL LRMKQRTLGE WLETDSLQFT SPDSTSVSSP  300
SGLNPSQKMN TFLTSLWGLS PKVVVITEQE SNLNGSAFME RVLEALNFYA ALFDCLESTV  360
TRSSIERQRV EKMLLGEEIK NIIACEGAER KERHEKLEKW ILRLESVGFG RVQMSYHSML  420
LGSRLLQSYG YDGYKVKEDN GFLFICWQDR PLFSVSAWGF QRQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein