PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139247.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 467aa    MW: 52529.2 Da    PI: 5.2521
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS447.31.1e-136484611373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA+ v+ g+ e+a+  L+++s+laspdgd+mqR+aayfteALa r+++s+++l kal++++    ++ ee+ a++lf+e++P+lk+++
  XP_022139247.1  48 LIHLLLACANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTKIL--SVPEEILAQRLFFELCPFLKLAY 140
                     689*************************************************************988887..59********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI ea++ge+++HiiDf   +++QW++Llq+L +Rp+gpp+lRiTg+++    +ke le+++ rL++ Ae+ ++pf+f++ v+++le+l+
  XP_022139247.1 141 VITNQAIIEAMDGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHLRITGIHE----QKEVLEQMALRLTEEAEKWDIPFQFTP-VVSKLENLD 230
                     ******************************************************....9**************************.799****** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll................................................desvsleserdevLklvkslsPk 237
                     le+Lrvk+gEalaV+++l+lh++l                                                 + ++ +++ +++L  +++lsPk
  XP_022139247.1 231 LESLRVKTGEALAVSSILELHSILatdddkktspsasnnlqkllrmkqrtlgewletdslqftspdstsvssPSGLNPSQKMNTFLTSLWGLSPK 325
                     ******************************************************************999876233333336788*********** PP

            GRAS 238 vvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332
                     vvv++eqe+++n++ F+er+leal++y+alfd+le+++ r s er+ vE++llg+ei+n++acegaer+erhe+lekW  rle++GF+ v++s++
  XP_022139247.1 326 VVVITEQESNLNGSAFMERVLEALNFYAALFDCLESTVTRSSIERQRVEKMLLGEEIKNIIACEGAERKERHEKLEKWILRLESVGFGRVQMSYH 420
                     *********************************************************************************************** PP

            GRAS 333 aakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      +   ++ll+ ++ dgy+v+e++g l+++W+drpL+svSaW
  XP_022139247.1 421 SMLLGSRLLQSYGYDGYKVKEDNGFLFICWQDRPLFSVSAW 461
                     ***************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MAGMFNGEGS SSVTSSPLQL FPWSLSPGLG SPYPFLRELK SEERGLCLIH LLLACANQVA  60
IGNIENANVG LEQISHLASP DGDTMQRIAA YFTEALADRI LKSWPGLHKA LNSTKILSVP  120
EEILAQRLFF ELCPFLKLAY VITNQAIIEA MDGERMIHII DFKSCEPAQW INLLQTLKDR  180
PDGPPHLRIT GIHEQKEVLE QMALRLTEEA EKWDIPFQFT PVVSKLENLD LESLRVKTGE  240
ALAVSSILEL HSILATDDDK KTSPSASNNL QKLLRMKQRT LGEWLETDSL QFTSPDSTSV  300
SSPSGLNPSQ KMNTFLTSLW GLSPKVVVIT EQESNLNGSA FMERVLEALN FYAALFDCLE  360
STVTRSSIER QRVEKMLLGE EIKNIIACEG AERKERHEKL EKWILRLESV GFGRVQMSYH  420
SMLLGSRLLQ SYGYDGYKVK EDNGFLFICW QDRPLFSVSA WGFQRQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein