PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139207.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 291aa    MW: 30845.5 Da    PI: 9.181
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.00017108130123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ C++ Fs++  L  H++ H
  XP_022139207.1 108 FSCNFCKREFSTSQALGGHQNAH 130
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MAELGKDQTC PSEASSISAA SDGGGRAAAM KLEMVVSDEV DGGGDRQSNS RLLLDLKLCN  60
EDSSDKSPKI LNSKRVGPAV VPSPAVTVGS SSHGHANELS SNSKSRVFSC NFCKREFSTS  120
QALGGHQNAH KPERALAKRR QGMELAGGSV GGVFGPPHLT SYYPYSTLST HNLYGSSFGK  180
PLGVRMDSMI HKSSSYRWLG TPGLQFHNGV DISGWGSRAA TVVAANNPMP SSTFERLKME  240
GIQGNKGGFR LSTAMNNGVG SSRNLNLSEA VLKTDHHVEN GHEQLDLSLK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.12e-19C2H2 family protein