PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022138868.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CAMTA

Protein Properties

Length: 920aa MW: 104087 Da PI: 8.1788

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022138868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166.5	4.4e-52	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwl+++ei+aiL n++ + ++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ve +++yYah+ +nptf rr XP_022138868.1 35 EaSARWLRPNEILAILCNYKYFIIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDNPTFVRR 129 4589***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_022138868.1 130 CYWLLDKSLEHIVLVHYRETQ 150 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 920 aa Download sequence
MSLSMKVDVP GTLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEILAIL CNYKYFIIHV 60 KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG 120 LDNPTFVRRC YWLLDKSLEH IVLVHYRETQ ELQSSPSTSM NSNSGSVSNP SSPWLLSEEL 180 DSRANHVCSV GKTELSEPSD TATVMTHEQR LHEINTLEWD ELLVTNEPFN PVIPKGERLS 240 CFDQQNEVPI NVAINLFGDM SSLNNPVESV GSTNSNISFS GSTNMSLTGG QTNLNVKSKG 300 SVPVNSVNTY GNLLNDGLQS QDSFGRWINE VITESSGSVI DPAVEPPISP MYNSYTDLAL 360 DHHQSSVMEQ IFNITDVSPA WAFSTEKTKI LITGFFHNEY VHLAKSNILV VCGDTSVNVD 420 FVQPGVYRCL VQPHSPGLVH FFVSLDGHKP ISQVLNFEYR APHLQELVVA SEQSYKWEEF 480 QVQMRLAHLL FSTSKSLSIM STKLTPIALN EAQKFAVKTS DISDSWIYLL KSVKENKTQF 540 PQARDGVLEI ILRSRLREWL IERIAEGSKK STEFDVKGQG VFHLCAILGY TWAVHLFVWS 600 GLSIDFRDKS GWTALHWAAY YGREKMVAVL LSVGAKPNLV TDPTSKNPGG CTAADLASMN 660 GYDGLAAYLS EKALISHFNE MSLAGNVSGS LEISTTTDTI NPDSISEEQM YIKDTLAAYR 720 TAADAAARIQ AAFREHSLKL RTRAVEFSTP EDEARGIIAA MKIQHAYRNF ETRKRMAAAA 780 RIQYRFRTWK IRKEFLHMRR QAIRIQAAFR GFQVRRQYCK IVWSVGVLEK AILRWRLKRK 840 GFRGLQVAPT EVAEQQESDA VENFYHVSQK QAEERVERAV VRVQALFRSK KAQEEYRRMK 900 LTYDEAALEY EVLTHPDTRA

Sequence ? help Back to Top

Protein Sequence Length: 920 aa Download sequence

MSLSMKVDVP GTLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEILAIL CNYKYFIIHV  60
KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG  120
LDNPTFVRRC YWLLDKSLEH IVLVHYRETQ ELQSSPSTSM NSNSGSVSNP SSPWLLSEEL  180
DSRANHVCSV GKTELSEPSD TATVMTHEQR LHEINTLEWD ELLVTNEPFN PVIPKGERLS  240
CFDQQNEVPI NVAINLFGDM SSLNNPVESV GSTNSNISFS GSTNMSLTGG QTNLNVKSKG  300
SVPVNSVNTY GNLLNDGLQS QDSFGRWINE VITESSGSVI DPAVEPPISP MYNSYTDLAL  360
DHHQSSVMEQ IFNITDVSPA WAFSTEKTKI LITGFFHNEY VHLAKSNILV VCGDTSVNVD  420
FVQPGVYRCL VQPHSPGLVH FFVSLDGHKP ISQVLNFEYR APHLQELVVA SEQSYKWEEF  480
QVQMRLAHLL FSTSKSLSIM STKLTPIALN EAQKFAVKTS DISDSWIYLL KSVKENKTQF  540
PQARDGVLEI ILRSRLREWL IERIAEGSKK STEFDVKGQG VFHLCAILGY TWAVHLFVWS  600
GLSIDFRDKS GWTALHWAAY YGREKMVAVL LSVGAKPNLV TDPTSKNPGG CTAADLASMN  660
GYDGLAAYLS EKALISHFNE MSLAGNVSGS LEISTTTDTI NPDSISEEQM YIKDTLAAYR  720
TAADAAARIQ AAFREHSLKL RTRAVEFSTP EDEARGIIAA MKIQHAYRNF ETRKRMAAAA  780
RIQYRFRTWK IRKEFLHMRR QAIRIQAAFR GFQVRRQYCK IVWSVGVLEK AILRWRLKRK  840
GFRGLQVAPT EVAEQQESDA VENFYHVSQK QAEERVERAV VRVQALFRSK KAQEEYRRMK  900
LTYDEAALEY EVLTHPDTRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein