PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022138353.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CPP

Protein Properties

Length: 577aa MW: 62864.1 Da PI: 7.6582

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022138353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.6	1.8e-16	293	331	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkks+Clk+YCeCfaag++C e C+C+dC+Nk + XP_022138353.1 293 CKRCNCKKSRCLKLYCECFAAGVYCIEPCSCQDCFNKPT 331 89**********************************976 PP
2	TCR	50.2	5.1e-16	377	416	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN XP_022138353.1 377 RHKRGCNCKKSSCLKKYCECYQGGVGCSINCRCEGCKNAF 416 589***********************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MDTTPDNTHN PKFEDSPVFN FINTLSPIKP LKSIHITHTF NNISFPSLPV FTSPPRPNHS 60 IPNPSRSPPA NEGAVTIMDQ LLGIFVPEVS PTPTTIQPPE TAAGEVLIFR CPVSSEAVEV 120 INEAEDGNVD KICVSFKPLS NLHRGNMRRR CLDFEMAGNP QTSASAAAHG ASSIRGSSSS 180 SSSSSSQPNQ NLLSLTSSGN AFRCTLPGIG LHLNALAATL KRSDSENLCS ETQPNLAPFY 240 APNSSQDQPL LASSTPERGS PLQEPALPIG EDLDQINPKK NRKWIDNAGI GACKRCNCKK 300 SRCLKLYCEC FAAGVYCIEP CSCQDCFNKP THEAVVLETR RQIESRNPLA FAPKVILNSD 360 SVSELGDDSN KTPASARHKR GCNCKKSSCL KKYCECYQGG VGCSINCRCE GCKNAFGKKD 420 ESALIGGTET EREEEEREHC QKNAEIQSDE DQQNPINAVP LASLPGGPRR SLIPLSFQLK 480 RKLPSFIDDE PFSRPSIRFK LEKHGIIQTE PRFEKTPCED EMPGTLCMGC CSSNTGVKSV 540 SPNSKRVTLP PPQGDFRPSP RISRKLILQS IPSFPSH

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MDTTPDNTHN PKFEDSPVFN FINTLSPIKP LKSIHITHTF NNISFPSLPV FTSPPRPNHS  60
IPNPSRSPPA NEGAVTIMDQ LLGIFVPEVS PTPTTIQPPE TAAGEVLIFR CPVSSEAVEV  120
INEAEDGNVD KICVSFKPLS NLHRGNMRRR CLDFEMAGNP QTSASAAAHG ASSIRGSSSS  180
SSSSSSQPNQ NLLSLTSSGN AFRCTLPGIG LHLNALAATL KRSDSENLCS ETQPNLAPFY  240
APNSSQDQPL LASSTPERGS PLQEPALPIG EDLDQINPKK NRKWIDNAGI GACKRCNCKK  300
SRCLKLYCEC FAAGVYCIEP CSCQDCFNKP THEAVVLETR RQIESRNPLA FAPKVILNSD  360
SVSELGDDSN KTPASARHKR GCNCKKSSCL KKYCECYQGG VGCSINCRCE GCKNAFGKKD  420
ESALIGGTET EREEEEREHC QKNAEIQSDE DQQNPINAVP LASLPGGPRR SLIPLSFQLK  480
RKLPSFIDDE PFSRPSIRFK LEKHGIIQTE PRFEKTPCED EMPGTLCMGC CSSNTGVKSV  540
SPNSKRVTLP PPQGDFRPSP RISRKLILQS IPSFPSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-103	CPP family protein