PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138269.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family SRS
Protein Properties Length: 295aa    MW: 33126.9 Da    PI: 7.8349
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702211.62e-65962393154
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 
                      g+++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpaakrrerqqq ++ ++++++ +    ++++     ++ +   + + ++a s+
  XP_022138269.1  96 GGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQRHQIMQHHQQLR----PDHPD---PTTPKRHRENHPPNA-ST 182
                     5789**********************************************999988765554322....11111...222222333333344.45 PP

          DUF702  98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                     + le++++P+e +s+a+frcv+vs++d+ ee+laYqtav+igGh+fkGiLydqG+e+
  XP_022138269.1 183 SGLEVAHFPPEFNSPAIFRCVKVSAIDNVEEQLAYQTAVNIGGHMFKGILYDQGPET 239
                     589999*************************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MRGLFYLGGK QEDEEEEIRG REQQLFSYRS NQEIYSKGLE IWPQYPHNQH HQQNMENFIS  60
FEVGPSRRTN FMINASNHDL VSRSGFAMMR GGGGGGGGMN CQDCGNQAKK DCSHLRCRTC  120
CKSRGFQCQT HVKSTWVPAA KRRERQQQRH QIMQHHQQLR PDHPDPTTPK RHRENHPPNA  180
STSGLEVAHF PPEFNSPAIF RCVKVSAIDN VEEQLAYQTA VNIGGHMFKG ILYDQGPETT  240
VAGEDGGQGL DLVIGASNGG GGRMNESPQF MEPPIYPIPI NAYTTGTQFF PPSRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.11e-62SRS family protein