PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022138226.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WOX

Protein Properties

Length: 290aa MW: 32925.9 Da PI: 5.5885

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022138226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.5	7.1e-21	101	161	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps++++++++ +l +++e++V++WFqNrRa+ k+ XP_022138226.1 101 RQRWTPTPVQLQILEQIFDEgNGTPSKQKIKDITLQLtqhgQISEANVYNWFQNRRARSKR 161 89***************99************************************97 PP
2	Wus_type_Homeobox	101.3	7e-33	100	163	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++it +L+++G+i+++NV++WFQNr+aR+++kq XP_022138226.1 100 ARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKDITLQLTQHGQISEANVYNWFQNRRARSKRKQ 163 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MMEWQNQQQQ IQTEQLQMQM QMQVEQLSNA DGAGGLYVKV MTDEQMELLR QQISVYASIC 60 EQLVEMHKAI TAQQDLAGMR LGNLYCDPIM ASAAGHKITA RQRWTPTPVQ LQILEQIFDE 120 GNGTPSKQKI KDITLQLTQH GQISEANVYN WFQNRRARSK RKQANSQPNN ADSEAETEVD 180 SPKEKKTKPE AFQTYEDFVP KSSNMYSQRS DLGAEFLSFD AQSNKGEPMF QSFGSGHISQ 240 MTPTQNHSTF FLHFPAVIHL NISSCSSYTI GHAESNMKIY TYFDCLGISE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	163	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-73	WOX family protein