PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022137823.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 355aa    MW: 37236 Da    PI: 8.4883
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022137823.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.7e-11289334655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri  ++ +L+el+P+     +k  s a++L +Av++Ik Lq
  XP_022137823.1 289 SIAERERRTRISGKLKKLQELVPNM----DKQTSYADMLDLAVQHIKGLQ 334
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MYQSTSSSSS SQKSMGPAGG GGGGGLTRYG SAPGSLLTSA VDSVIGGGRH PDSTASLRTP  60
PPSFGGHYFS SADSSTSNDL KSSSSGAAAA AALNRSYGIH DLALGDFSIP RNFNSNGGQS  120
SSSSPLVRQR SSPAGFLGHF AVADGNGSGF SVTRGGGNYG SQNNNNGVCR LKSQLSFSGQ  180
DSLSQISEMS ESVVEGVNSS NANANIAITH SFGIDSWDSA NSNSIVFTAP HPKRPHHSDS  240
DFFNCLESQF SMPQTSLEMA TVERLLQIPE DSVPCKIRAK RGCATHPRSI AERERRTRIS  300
GKLKKLQELV PNMDKQTSYA DMLDLAVQHI KGLQNQIQKL NKEVENCSCG CKGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43140.25e-63bHLH family protein