PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137686.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NF-X1

Protein Properties

Length: 1095aa MW: 119704 Da PI: 8.0817

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137686.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	20.7	9.1e-07	288	306	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H C+++CH GpC+pC+ XP_022137686.1 288 CGRHWCKRICHVGPCDPCQ 306 ******************6 PP
2	zf-NF-X1	20.6	9.3e-07	410	427	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CGkH+C+ CH+G+C pC XP_022137686.1 410 CGKHRCEDACHTGNCSPC 427 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 1095 aa Download sequence
MSSQARNVRK DRSRFPASNS RQEWVPRGST NTHVNQPLDV NLNDNRNGRE LSSCTPHPVN 60 SRDRGNHGPR VYMGPRRNQR KDKEKDKERS GDQGEKEFKD SNLPQLVHEI QEKLMKGTVE 120 CMICYDMVRR SAPIWSCSSC FCIFHLTCIK KWARAPTSTD LVAEKNQGLN WRCPGCQSVQ 180 LTSSKEIRYV CFCRKRQEPP SDLYLTPHSC GEPCGKPLDR EMLVAGGSKE DLCPHNCVLQ 240 CHPGPCPPCK AFAPPRLCPC GKKLITTRCS DRKSTLTCGQ HCEKLLDCGR HWCKRICHVG 300 PCDPCQVLVS ASCFCKKKRE LVLCGGMTLK GEVNAEDGVF NCSSICGKTL NCGNHFCSEV 360 CHPGPCGGCD LMPDMIKTCY CGKTRLQEER TSCLDPIPTC PEPCEKLLPC GKHRCEDACH 420 TGNCSPCLVQ VVQKCRCGST SRNVECYKTS SPTDVFTCEK PCGWKKNCGR HRCSERCCPL 480 SSSSYSHSGD WDPHFCLMRC GKKLRCGQHA CESLCHSGHC SPCPETIFTD LTCACGKTSI 540 PPPLPCGTPP PSCQLPCSVP QPCGHSSTHS CHFGDCPPCT VPIAKECIGG HVVLRNIPCG 600 SRDIRCNKLC GKTRQCGMHA CSRTCHPPPC DTSVGSDLGQ RTSCGQTCGA PRRDCRHTCT 660 APCHPSASCP DARCEFPVII TCSCGRITAS VPCDAGGSSI GFNTDTLYAS IIQKLPVPLQ 720 PIEANGKKIP LGQRKLTCDD DCSKLERKRV LADAFDINPP NLDALHLGDS SASELLADLF 780 RRDSKWVLSV EERCKFLVLG KNRAAMSGLK VHVFCPMLKE KRDAVRLIAE RWKLATNTVG 840 WEPKRFITIH VTPKSKVPPR VLGVKGSTTT GTPHPPVFDP LVDMDPRLVV SFPDLPREAD 900 ISALVLRFGG ECELVWLNDK NALAVFSDPA RAATAMRRLD HGTAYHGASL LQNGGASASS 960 NANAWGGENT KEGGALKSNN PWKRAVVQES SWADKSWGGD EEWAGSSIDV QAPVWRKEAP 1020 ISASFNRWHA LDPESVVSSS SRSAEHNPGN RVGHSSPGSE SSTSRALSSG GMQGVIPDSG 1080 TEMLEVAEDW EKAYD

Sequence ? help Back to Top

Protein Sequence Length: 1095 aa Download sequence

MSSQARNVRK DRSRFPASNS RQEWVPRGST NTHVNQPLDV NLNDNRNGRE LSSCTPHPVN  60
SRDRGNHGPR VYMGPRRNQR KDKEKDKERS GDQGEKEFKD SNLPQLVHEI QEKLMKGTVE  120
CMICYDMVRR SAPIWSCSSC FCIFHLTCIK KWARAPTSTD LVAEKNQGLN WRCPGCQSVQ  180
LTSSKEIRYV CFCRKRQEPP SDLYLTPHSC GEPCGKPLDR EMLVAGGSKE DLCPHNCVLQ  240
CHPGPCPPCK AFAPPRLCPC GKKLITTRCS DRKSTLTCGQ HCEKLLDCGR HWCKRICHVG  300
PCDPCQVLVS ASCFCKKKRE LVLCGGMTLK GEVNAEDGVF NCSSICGKTL NCGNHFCSEV  360
CHPGPCGGCD LMPDMIKTCY CGKTRLQEER TSCLDPIPTC PEPCEKLLPC GKHRCEDACH  420
TGNCSPCLVQ VVQKCRCGST SRNVECYKTS SPTDVFTCEK PCGWKKNCGR HRCSERCCPL  480
SSSSYSHSGD WDPHFCLMRC GKKLRCGQHA CESLCHSGHC SPCPETIFTD LTCACGKTSI  540
PPPLPCGTPP PSCQLPCSVP QPCGHSSTHS CHFGDCPPCT VPIAKECIGG HVVLRNIPCG  600
SRDIRCNKLC GKTRQCGMHA CSRTCHPPPC DTSVGSDLGQ RTSCGQTCGA PRRDCRHTCT  660
APCHPSASCP DARCEFPVII TCSCGRITAS VPCDAGGSSI GFNTDTLYAS IIQKLPVPLQ  720
PIEANGKKIP LGQRKLTCDD DCSKLERKRV LADAFDINPP NLDALHLGDS SASELLADLF  780
RRDSKWVLSV EERCKFLVLG KNRAAMSGLK VHVFCPMLKE KRDAVRLIAE RWKLATNTVG  840
WEPKRFITIH VTPKSKVPPR VLGVKGSTTT GTPHPPVFDP LVDMDPRLVV SFPDLPREAD  900
ISALVLRFGG ECELVWLNDK NALAVFSDPA RAATAMRRLD HGTAYHGASL LQNGGASASS  960
NANAWGGENT KEGGALKSNN PWKRAVVQES SWADKSWGGD EEWAGSSIDV QAPVWRKEAP  1020
ISASFNRWHA LDPESVVSSS SRSAEHNPGN RVGHSSPGSE SSTSRALSSG GMQGVIPDSG  1080
TEMLEVAEDW EKAYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein