PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137635.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

E2F/DP

Protein Properties

Length: 380aa MW: 42511.5 Da PI: 8.8457

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	71.6	9e-23	23	88	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl l+++ + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++w+g XP_022137635.1 23 RKQKSLGLLCSNFLCLYNHDGVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88 79***************999********.....****************************98 PP
2	E2F_TDP	76.1	3.4e-24	154	234	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+ ++++l+e+a+ L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g XP_022137635.1 154 RREKSLALLTQNFVKLFICSHVNMISLDEAARLLLGDghnssIMRTKVRRLYDIANVLSSMNLIEKthttdTRKPAFRWLG 234 689************************************999**********************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MAAMPSSSAL PDSSSSRHHT YSRKQKSLGL LCSNFLCLYN HDGVHSIGLD DAASRLGVER 60 RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDGNDYAKVS 120 DDEDDDERFS NPTGSQNSTA AVPKSSSSLK TDNRREKSLA LLTQNFVKLF ICSHVNMISL 180 DEAARLLLGD GHNSSIMRTK VRRLYDIANV LSSMNLIEKT HTTDTRKPAF RWLGVRGKVK 240 NEPTVLPESR KRAFGTDVTN VSYKKTKAEN STTHESLTHC LNMQKQVQCE NSSQEGSQNS 300 QDQECERTSK SYQFGPFAPV TVAKVGISNN NVKRTHDWES LSSTFCPQYH NQALKELFSH 360 YVEAWKSWYS EAVKKPIQIS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MAAMPSSSAL PDSSSSRHHT YSRKQKSLGL LCSNFLCLYN HDGVHSIGLD DAASRLGVER  60
RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDGNDYAKVS  120
DDEDDDERFS NPTGSQNSTA AVPKSSSSLK TDNRREKSLA LLTQNFVKLF ICSHVNMISL  180
DEAARLLLGD GHNSSIMRTK VRRLYDIANV LSSMNLIEKT HTTDTRKPAF RWLGVRGKVK  240
NEPTVLPESR KRAFGTDVTN VSYKKTKAEN STTHESLTHC LNMQKQVQCE NSSQEGSQNS  300
QDQECERTSK SYQFGPFAPV TVAKVGISNN NVKRTHDWES LSSTFCPQYH NQALKELFSH  360
YVEAWKSWYS EAVKKPIQIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-131	E2F/DP family protein