PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022137600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | FAR1 | ||||||||
Protein Properties | Length: 861aa MW: 98611.6 Da PI: 7.9166 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 80.3 | 3.4e-25 | 76 | 183 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkekdgkwev 78 fY+eYAk+vGF v +++s++s+ +g++++++f C+k+g+++e+ +++ r +r+ ++t+Cka+++vk+ ++g+w + XP_022137600.1 76 FYKEYAKSVGFAVIIKASRRSRISGKFIDAKFACTKYGNKRESGVVevsdhvtnpdnaiviptkKKRGRINRSWEKTDCKACMHVKLLQSGRWAI 170 ***************************************9999877899************987788888************************* PP FAR1 79 tkleleHnHelap 91 +++ +eHnHe++p XP_022137600.1 171 HSFIKEHNHEIFP 183 **********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 861 aa Download sequence |
MDNNPVHCGK EVCIRDGTDG YSNMVAKDNT GTIVNIEMSE NRNTVYSQNV INLKSFKVAE 60 PHEGMEFESK EGAFTFYKEY AKSVGFAVII KASRRSRISG KFIDAKFACT KYGNKRESGV 120 VEVSDHVTNP DNAIVIPTKK KRGRINRSWE KTDCKACMHV KLLQSGRWAI HSFIKEHNHE 180 IFPNEFYYFR GHRNLEVGSS NTDVFHGNRA RRKNICNTMS RQSGSCAKAK KQKVAVADQR 240 KVRHLAIEEG DVQVMMDHFV CMQDENPNFF YSIDLNEEQR LRNVFWVDAK GRLDYFNFGD 300 VVFFDTTYIK NEYRLPFVPI IGVNHHFQFV LLGCSLVADD TKSTYAWLMR AWLRAMHKCP 360 PNVILTEQDE ALKEAIAEAL PDSCHCYCLW DIYGKIPEKL SQVIRQHENF MLKFDECVFK 420 SWTTEQFEKQ WLRIIDEFDL SHDSWFKLLY ADRERWVPAF MKNIFLAGMS TSQRPDGINS 480 FLDKCIQRKT SLKEFLDQYR TFIRDKFEGE AKADFETLHK QPGLKSPSPF GKQMAALYTH 540 GVFKKFQVEV LGVVACHPKK ESEDGEIKVF RVQDFEESQD FLVEWNEATS DISCLCRLFE 600 FNGYLCRHVL IVLQMSGIHS IPSQYVLTRW TRDAKSRQQT TKGSNVESKV QRYNDLCQQA 660 FRLSNEGSLS RESYNVAFDA LEEALRKCES LNGLIQPFPV VQSSHESEEV NQGKNTNKTN 720 KMNAATINRK DHFEPQITTI GIHDGWQQLG HSNSRPPSLH CSDEQEGLQG EQRRTRAPSL 780 ESYFGSQQLV HAMGKVSSIA SSRDGCFENQ HITRGLGVGK LNFRPDVVVP GRLNIQVGPH 840 DMDPSSAGSI EVHGASSKQG K |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 211 | 233 | RRKNICNTMSRQSGSCAKAKKQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 0.0 | FAR1 family protein |