PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137598.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 861aa MW: 98611.6 Da PI: 7.9166

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.3	3.4e-25	76	183	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkekdgkwev 78 fY+eYAk+vGF v +++s++s+ +g++++++f C+k+g+++e+ +++ r +r+ ++t+Cka+++vk+ ++g+w + XP_022137598.1 76 FYKEYAKSVGFAVIIKASRRSRISGKFIDAKFACTKYGNKRESGVVevsdhvtnpdnaiviptkKKRGRINRSWEKTDCKACMHVKLLQSGRWAI 170 *************************************9999877899********987788888********************* PP FAR1 79 tkleleHnHelap 91 +++ +eHnHe++p XP_022137598.1 171 HSFIKEHNHEIFP 183 ********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 861 aa Download sequence
MDNNPVHCGK EVCIRDGTDG YSNMVAKDNT GTIVNIEMSE NRNTVYSQNV INLKSFKVAE 60 PHEGMEFESK EGAFTFYKEY AKSVGFAVII KASRRSRISG KFIDAKFACT KYGNKRESGV 120 VEVSDHVTNP DNAIVIPTKK KRGRINRSWE KTDCKACMHV KLLQSGRWAI HSFIKEHNHE 180 IFPNEFYYFR GHRNLEVGSS NTDVFHGNRA RRKNICNTMS RQSGSCAKAK KQKVAVADQR 240 KVRHLAIEEG DVQVMMDHFV CMQDENPNFF YSIDLNEEQR LRNVFWVDAK GRLDYFNFGD 300 VVFFDTTYIK NEYRLPFVPI IGVNHHFQFV LLGCSLVADD TKSTYAWLMR AWLRAMHKCP 360 PNVILTEQDE ALKEAIAEAL PDSCHCYCLW DIYGKIPEKL SQVIRQHENF MLKFDECVFK 420 SWTTEQFEKQ WLRIIDEFDL SHDSWFKLLY ADRERWVPAF MKNIFLAGMS TSQRPDGINS 480 FLDKCIQRKT SLKEFLDQYR TFIRDKFEGE AKADFETLHK QPGLKSPSPF GKQMAALYTH 540 GVFKKFQVEV LGVVACHPKK ESEDGEIKVF RVQDFEESQD FLVEWNEATS DISCLCRLFE 600 FNGYLCRHVL IVLQMSGIHS IPSQYVLTRW TRDAKSRQQT TKGSNVESKV QRYNDLCQQA 660 FRLSNEGSLS RESYNVAFDA LEEALRKCES LNGLIQPFPV VQSSHESEEV NQGKNTNKTN 720 KMNAATINRK DHFEPQITTI GIHDGWQQLG HSNSRPPSLH CSDEQEGLQG EQRRTRAPSL 780 ESYFGSQQLV HAMGKVSSIA SSRDGCFENQ HITRGLGVGK LNFRPDVVVP GRLNIQVGPH 840 DMDPSSAGSI EVHGASSKQG K

Sequence ? help Back to Top

Protein Sequence Length: 861 aa Download sequence

MDNNPVHCGK EVCIRDGTDG YSNMVAKDNT GTIVNIEMSE NRNTVYSQNV INLKSFKVAE  60
PHEGMEFESK EGAFTFYKEY AKSVGFAVII KASRRSRISG KFIDAKFACT KYGNKRESGV  120
VEVSDHVTNP DNAIVIPTKK KRGRINRSWE KTDCKACMHV KLLQSGRWAI HSFIKEHNHE  180
IFPNEFYYFR GHRNLEVGSS NTDVFHGNRA RRKNICNTMS RQSGSCAKAK KQKVAVADQR  240
KVRHLAIEEG DVQVMMDHFV CMQDENPNFF YSIDLNEEQR LRNVFWVDAK GRLDYFNFGD  300
VVFFDTTYIK NEYRLPFVPI IGVNHHFQFV LLGCSLVADD TKSTYAWLMR AWLRAMHKCP  360
PNVILTEQDE ALKEAIAEAL PDSCHCYCLW DIYGKIPEKL SQVIRQHENF MLKFDECVFK  420
SWTTEQFEKQ WLRIIDEFDL SHDSWFKLLY ADRERWVPAF MKNIFLAGMS TSQRPDGINS  480
FLDKCIQRKT SLKEFLDQYR TFIRDKFEGE AKADFETLHK QPGLKSPSPF GKQMAALYTH  540
GVFKKFQVEV LGVVACHPKK ESEDGEIKVF RVQDFEESQD FLVEWNEATS DISCLCRLFE  600
FNGYLCRHVL IVLQMSGIHS IPSQYVLTRW TRDAKSRQQT TKGSNVESKV QRYNDLCQQA  660
FRLSNEGSLS RESYNVAFDA LEEALRKCES LNGLIQPFPV VQSSHESEEV NQGKNTNKTN  720
KMNAATINRK DHFEPQITTI GIHDGWQQLG HSNSRPPSLH CSDEQEGLQG EQRRTRAPSL  780
ESYFGSQQLV HAMGKVSSIA SSRDGCFENQ HITRGLGVGK LNFRPDVVVP GRLNIQVGPH  840
DMDPSSAGSI EVHGASSKQG K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	211	233	RRKNICNTMSRQSGSCAKAKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein