PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137545.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 456aa MW: 50796.1 Da PI: 8.4897

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.5	3.8e-16	265	310	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L++l+P+a K +Ka++L +++eY+k+Lq XP_022137545.1 265 HNQSERRRRDRINEKMKALQKLVPNA-----SKTDKASMLDEVIEYLKQLQ 310 9**********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MCCVRVERER EREGERERER AYMSHCVVPK WNLSHERQEQ VEEEEGKRSF HVPAQKNHHS 60 TTSPLVPFYQ QMAKNGVTEL TWQNGQLALH AIDGLHSTVP AKPTWSRAND TLESVVNQAK 120 IQTHSSQLTH QGEPQVHTGR ALAPSGANVS GKWVERGNQE PPARKRTRST SDYAGKNVSA 180 SNNTMQVDYG DHSACGSASA ALCRDNDTTL MTWASFDSPR SMKTKSIDED SACHVESENQ 240 EEEQDTKRGV SHSHSARRSR AAAIHNQSER RRRDRINEKM KALQKLVPNA SKTDKASMLD 300 EVIEYLKQLQ AQVQFMSVRS MQQMIMPIGM QQQLQMSLLA RMGMGVGLGM GMGMLDMSMA 360 RTAPQSLPPL IHPTSVPATP PAFVPPPFLL PPAIPRQDPT QAKPATNDSV DPFCAFLAQT 420 MNMDIYNKMA AFYRQQVNQT TNAVSSPPQS NNVQGN

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MCCVRVERER EREGERERER AYMSHCVVPK WNLSHERQEQ VEEEEGKRSF HVPAQKNHHS  60
TTSPLVPFYQ QMAKNGVTEL TWQNGQLALH AIDGLHSTVP AKPTWSRAND TLESVVNQAK  120
IQTHSSQLTH QGEPQVHTGR ALAPSGANVS GKWVERGNQE PPARKRTRST SDYAGKNVSA  180
SNNTMQVDYG DHSACGSASA ALCRDNDTTL MTWASFDSPR SMKTKSIDED SACHVESENQ  240
EEEQDTKRGV SHSHSARRSR AAAIHNQSER RRRDRINEKM KALQKLVPNA SKTDKASMLD  300
EVIEYLKQLQ AQVQFMSVRS MQQMIMPIGM QQQLQMSLLA RMGMGVGLGM GMGMLDMSMA  360
RTAPQSLPPL IHPTSVPATP PAFVPPPFLL PPAIPRQDPT QAKPATNDSV DPFCAFLAQT  420
MNMDIYNKMA AFYRQQVNQT TNAVSSPPQS NNVQGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	269	274	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	2e-34	bHLH family protein