PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022137516.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 336aa    MW: 38209.6 Da    PI: 4.6445
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022137516.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79.1e-16113160354
             AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     ykGVr++k +g+++AeIrd +     r +r +lg++ taeeAa a+ + + ++e
  XP_022137516.1 113 YKGVRRRK-WGKYAAEIRDpF-----RgRRLWLGTYNTAEEAAVAYQRKKCEFE 160
                     9****998.**********66.....56******************88877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MPGFREQFPI RDVYGKEGKK IKQLNQGKSN SVRKIRVVFH DPDATDCSSE EDELFNKEAK  60
KIGGKRFIWE IPFSDIRHKP SKESSHKENG GGKIRIKTEV KGSSRTQRSS SMYKGVRRRK  120
WGKYAAEIRD PFRGRRLWLG TYNTAEEAAV AYQRKKCEFE SMQSKDNSEL CGEKSEEEKK  180
SGSIVDASAE SEEIIALFSH PSPSSVLDVC AGSLCSNELK NVVQECNVDQ TVAYSIKEEY  240
KVYEDEQSIS DILEDTSIPL PIPPLDAREL DFQGLDDSSL ICNDFDQLSD DMNYIDDYTL  300
YNIENSLGAL DLPPMDIDFD KEFSWFDETL SSISCM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114120KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-22ERF family protein