PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022137491.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | LBD | ||||||||
Protein Properties | Length: 203aa MW: 21959.7 Da PI: 6.9923 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 97.1 | 1.8e-30 | 2 | 101 | 1 | 95 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C+++Cvl+ ++ p++q +++ +++k+FG+s +l++++a+p+++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+ XP_022137491.1 2 SCNGCRVLRKGCSEGCVLRSCLhwidsPESQGNATLFLAKFFGRSDLLSFISAVPDHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQA 96 6********************************************************************************************** PP DUF260 91 kaela 95 +ae++ XP_022137491.1 97 AAETV 101 *9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MSCNGCRVLR KGCSEGCVLR SCLHWIDSPE SQGNATLFLA KFFGRSDLLS FISAVPDHQR 60 PALFQSLLFE ACGRTVNPVS GAVGLLSSGN WHVCQAAAET VLGGGVLRPI PGIDVSGNST 120 GHVDESSVSF STDVWTTQNL QFYPSVPSGY RRLSDLGGGK NHYPQMENRR SLDSEESVMT 180 SFGSGDLGDG DRRKERKLLN LFI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 191 | 198 | DRRKERKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37540.1 | 9e-66 | LBD family protein |