PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137181.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 607aa MW: 65615.7 Da PI: 7.9794

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137181.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.7	2.8e-08	211	255	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed l+ av++ G g+W+ I + +Rt+ q+ rw XP_022137181.1 211 RKPWSKAEDMELIAAVQKCGEGNWANILKgdFK-GNRTASQLSQRW 255 789************************983234.599999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MGSLMIERKE KQKKGIISSE DDISTLLERY SVRTILTLLR EVAQVSEVRI DWDKLVKNTS 60 TGISNAREYQ MLWRHLAYRH TLLENMDCLT GPLDDDSDLD FEIESFPSVN SESLNEAAAF 120 VKVLIANAIP SESDIPSSSA VEAPLTIGIS NSQSSRANLE NPQSGCLLQE MYVAIPISIQ 180 RQPISSTPAV STEVFDVNGA AGGNAASRKR RKPWSKAEDM ELIAAVQKCG EGNWANILKG 240 DFKGNRTASQ LSQRWSIIRK RRCNLNVGAN ATGTQISKAQ IDATHRALSF ALDLPVNNSK 300 TEYSNINSCI ISSASGAEAP VQMQNQSPQI PKPSRPVLVE PLPSAVKPGI DTSKNALMMK 360 STHNSDSIVR ATAVAAGARI VSPSDAASLL KAAQARNAIH IKSSCASSIK PPVHGNAPIH 420 SDPRPNIHYI STGKLASPGS NYVGGKPNVV CNNSVKAISP IVLHHRSTSA ILMNVQSDQR 480 SPATESPSKR EIKSSEERKM PEPVATPKEE ARESEAVRGG NFATERSDGE LRSLSTCIEN 540 HNGSNTEIDE NGIKAGCSEQ VETKKNANDV EIRGSPDTQG SKNESVADIV GHSTQNEQMN 600 LKAYIRR

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MGSLMIERKE KQKKGIISSE DDISTLLERY SVRTILTLLR EVAQVSEVRI DWDKLVKNTS  60
TGISNAREYQ MLWRHLAYRH TLLENMDCLT GPLDDDSDLD FEIESFPSVN SESLNEAAAF  120
VKVLIANAIP SESDIPSSSA VEAPLTIGIS NSQSSRANLE NPQSGCLLQE MYVAIPISIQ  180
RQPISSTPAV STEVFDVNGA AGGNAASRKR RKPWSKAEDM ELIAAVQKCG EGNWANILKG  240
DFKGNRTASQ LSQRWSIIRK RRCNLNVGAN ATGTQISKAQ IDATHRALSF ALDLPVNNSK  300
TEYSNINSCI ISSASGAEAP VQMQNQSPQI PKPSRPVLVE PLPSAVKPGI DTSKNALMMK  360
STHNSDSIVR ATAVAAGARI VSPSDAASLL KAAQARNAIH IKSSCASSIK PPVHGNAPIH  420
SDPRPNIHYI STGKLASPGS NYVGGKPNVV CNNSVKAISP IVLHHRSTSA ILMNVQSDQR  480
SPATESPSKR EIKSSEERKM PEPVATPKEE ARESEAVRGG NFATERSDGE LRSLSTCIEN  540
HNGSNTEIDE NGIKAGCSEQ VETKKNANDV EIRGSPDTQG SKNESVADIV GHSTQNEQMN  600
LKAYIRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	8e-76	MYB_related family protein