PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137093.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 515aa MW: 57845.5 Da PI: 8.6291

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00088	423	445	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k Fs+ L H r+H XP_022137093.1 423 HQCSICSKIFSSGQALGGHKRSH 445 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MEADRVLKHF CKLCNRSFPC GRSLGGHMRS HLINNQAETG ENLRKMNLKK AGSNSGMDNF 60 LGDGFSDGYS LRKNPKKTCR LADFSAEDRF CRECGRSFQS WKALFGHMKC HSTETERVSS 120 NLELDSQSDS EIAAANRGKR SRRQTRYMAA DTSSSFSFGA AASSSVSDQN DQEQEEVALC 180 LMMLSRDVGG FYSTTESSDN DSMPKQVPSL VPKIHFSKAV EAIPTVCISG KMVKLREFHS 240 RKMELSEMDS AYLKFEGSNS EFSASVIKVS KNDEKSQQID RFGSSSNNRT EFNQPQFISS 300 KFSTDQRKFH ELSNQELRSN SYRRSPPHYL NSEAYKIREK RSKFQCNSCH KIFHSYQALG 360 GHRASHKKTK GCLVSKTESS ENSIETEISN DPTFESNPTI TVLEMENQQE SDMGYEKKNR 420 KHHQCSICSK IFSSGQALGG HKRSHLIGGS ESRKKFPQTT AIQKPEPQAE IRDYLDLNLP 480 APIEEEGNSH LGSLKPWWVG AGGSHQHEQA LVGLI

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MEADRVLKHF CKLCNRSFPC GRSLGGHMRS HLINNQAETG ENLRKMNLKK AGSNSGMDNF  60
LGDGFSDGYS LRKNPKKTCR LADFSAEDRF CRECGRSFQS WKALFGHMKC HSTETERVSS  120
NLELDSQSDS EIAAANRGKR SRRQTRYMAA DTSSSFSFGA AASSSVSDQN DQEQEEVALC  180
LMMLSRDVGG FYSTTESSDN DSMPKQVPSL VPKIHFSKAV EAIPTVCISG KMVKLREFHS  240
RKMELSEMDS AYLKFEGSNS EFSASVIKVS KNDEKSQQID RFGSSSNNRT EFNQPQFISS  300
KFSTDQRKFH ELSNQELRSN SYRRSPPHYL NSEAYKIREK RSKFQCNSCH KIFHSYQALG  360
GHRASHKKTK GCLVSKTESS ENSIETEISN DPTFESNPTI TVLEMENQQE SDMGYEKKNR  420
KHHQCSICSK IFSSGQALGG HKRSHLIGGS ESRKKFPQTT AIQKPEPQAE IRDYLDLNLP  480
APIEEEGNSH LGSLKPWWVG AGGSHQHEQA LVGLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	2e-25	C2H2 family protein