PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137038.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 348aa MW: 38423.8 Da PI: 10.407

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.2	4.1e-15	9	87	17	98
E--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +p +f +h + ++ +l+l++++g+sW+v+ ++ +++l +GW Fv+ ng++ gD++vF+l+++ e +v++fr XP_022137038.1 9 NIPCQFSMAHL--PSCKLKLVLQNLNGESWTVNSVPaTRVHTSHTLCGGWMAFVRGNGINMGDVCVFELVRDCEL--RVHIFR 87 58888887774..458889************955677777899**********************996655..999998 PP
2	B3	47	4.7e-15	235	317	11	96
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + s l +p +f ++h + +++++ l+ ++g W v+ + ++ ++++ +GW +Fv++ng++ gD+++F+l+++ e +v+v XP_022137038.1 235 SGSYTLKIPHRFSSAHFPN--SKTEILLRGPNGGCWIVNSVPdSMGRMMHTFCGGWMSFVRDNGIQIGDICIFELVHKCEL--LVHV 317 4556799*******644..5679***********6545555559999*******************9985444..6655 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MLSSFMMQNI PCQFSMAHLP SCKLKLVLQN LNGESWTVNS VPATRVHTSH TLCGGWMAFV 60 RGNGINMGDV CVFELVRDCE LRVHIFRVGK EISEDQTGKG ALSRLGAGHA VIPRKALKSL 120 PKKMNGNSQK VHSKRSKRIE ISDKKSSKSW QDSFCNDARK HSSAKKVSTK VMVCSQSNKA 180 SKVLVNQRTS VKGDLVLPAR HGLRAMLALD EERAAKSFVS CFPTFVRIMK KFNISGSYTL 240 KIPHRFSSAH FPNSKTEILL RGPNGGCWIV NSVPDSMGRM MHTFCGGWMS FVRDNGIQIG 300 DICIFELVHK CELLVHVTGV GKKGFDLSSE VATCELAIVP TTSNHPSM

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MLSSFMMQNI PCQFSMAHLP SCKLKLVLQN LNGESWTVNS VPATRVHTSH TLCGGWMAFV  60
RGNGINMGDV CVFELVRDCE LRVHIFRVGK EISEDQTGKG ALSRLGAGHA VIPRKALKSL  120
PKKMNGNSQK VHSKRSKRIE ISDKKSSKSW QDSFCNDARK HSSAKKVSTK VMVCSQSNKA  180
SKVLVNQRTS VKGDLVLPAR HGLRAMLALD EERAAKSFVS CFPTFVRIMK KFNISGSYTL  240
KIPHRFSSAH FPNSKTEILL RGPNGGCWIV NSVPDSMGRM MHTFCGGWMS FVRDNGIQIG  300
DICIFELVHK CELLVHVTGV GKKGFDLSSE VATCELAIVP TTSNHPSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18090.1	1e-09	B3 family protein