PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136991.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 481aa MW: 53178.6 Da PI: 8.1521

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.9e-17	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+ XP_022136991.1 59 REKWTEEEHQKFLEALKLYGRG-WRQIKEHVG-TKTAVQIRSHAQKF 103 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MGVQEKNEGT LSNGSTAANN CLSNDGAQLD PLMRVSSLSS YGNENALKVR KPYTISKQRE 60 KWTEEEHQKF LEALKLYGRG WRQIKEHVGT KTAVQIRSHA QKFFSKVVRE SSGSNESSIN 120 PIEIPPPRPK RKPLHPYPRK AVDSLKAISV AREPERSPSP NLSVAEKETQ SPTSVLTAFS 180 SDDQISVVSE QQNRCPSPIS QAVDMQSTRL SPARKGELYL PSKSSGGEEK GMLSLESSSE 240 RFPEDFLTLK FKPGSARMKV DNKSHSPVRS IKLFGRTVMV TDDKKLSPTN TVLTESLEFD 300 DESKNKCEVY AEKPVQMLPS KHLDVNLCLG MDKGDSNMSP GEAPTNTAGN QEKNVLHVKA 360 VPNASQTCWS LYQNVPCFYL APSDQTSAGT CTDHVMEERM QNDNSMESSC ADSYSGSQGK 420 DRNENEKPEA QCQEPCVVGR GNASESKKGF VPYKRCLAQR DTSSSLIVSE EREGRRARIC 480 S

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MGVQEKNEGT LSNGSTAANN CLSNDGAQLD PLMRVSSLSS YGNENALKVR KPYTISKQRE  60
KWTEEEHQKF LEALKLYGRG WRQIKEHVGT KTAVQIRSHA QKFFSKVVRE SSGSNESSIN  120
PIEIPPPRPK RKPLHPYPRK AVDSLKAISV AREPERSPSP NLSVAEKETQ SPTSVLTAFS  180
SDDQISVVSE QQNRCPSPIS QAVDMQSTRL SPARKGELYL PSKSSGGEEK GMLSLESSSE  240
RFPEDFLTLK FKPGSARMKV DNKSHSPVRS IKLFGRTVMV TDDKKLSPTN TVLTESLEFD  300
DESKNKCEVY AEKPVQMLPS KHLDVNLCLG MDKGDSNMSP GEAPTNTAGN QEKNVLHVKA  360
VPNASQTCWS LYQNVPCFYL APSDQTSAGT CTDHVMEERM QNDNSMESSC ADSYSGSQGK  420
DRNENEKPEA QCQEPCVVGR GNASESKKGF VPYKRCLAQR DTSSSLIVSE EREGRRARIC  480
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	1e-48	MYB_related family protein