PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136753.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 265aa MW: 30278 Da PI: 8.7129

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.6e-12	63	108	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +Er+RR+++ ++f L llP + kK++Ka++L A++YIk+ XP_022136753.1 63 DHVLAERKRREKLSQRFIALSALLPGL-----KKMDKASVLGDAIKYIKQV 108 58899********************.....9**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MNNNNTCDSR AFVAASEEPT FSRPTAEIIC SSHGMHTSFS PPSINNNIPE KRKPTPTTAH 60 AQDHVLAERK RREKLSQRFI ALSALLPGLK KMDKASVLGD AIKYIKQVEE RVRVLEEKAK 120 KRSIESAILV NKSHLYNDCD EEISRFSDQK QLPEIEARIS DDKNNVLVRI HCEKNEGLFA 180 KLLGEMEKMN LTIVNANFFP FGTSTQYMVL VAQVPLSLSL IPIFSSLNNK YFEQNLHSFI 240 TFFFLILNYM CLTTKLKKMV FEEML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	51	72	KRKPTPTTAHAQDHVLAERKRR
2	68	73	ERKRRE
3	69	74	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	6e-47	bHLH family protein