PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136699.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 645aa MW: 73960.7 Da PI: 8.3952

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.2e-09	588	633	3	46
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck ++ + XP_022136699.1 588 DWSAVQERALVQALKTFPKEtsqRWERVAAAVP-GKTVNQCKKKFTS 633 6******************************.*******9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
MTVQANLRLL TYSQEIVDGQ PIYVSSNCLP IKASKYEPAG HSFHYAALKL LGCEDDEVSD 60 DNEQTADDAE QKYAPSFDSY SSKGKKKSGG STQQDHYALL GLSHLRYLAT EDQIKKSYRE 120 TALKYHPDKQ AALILAEETE SAKQAKKDEI ESHFKSIQEA YEVLIDPVKR RIYDSTDEFD 180 DEIPTDCAPQ DFFKVYGPAF MRNGRWSVNQ SVPSLGDDKT PLKEVDDFYN FWYSFKSWRE 240 FPHADEFDIE QAESRDHKRW MERQNAKLTE KARKEEYARI RTLVDNAYKR DPRIQRRKEE 300 EKAEKQRKKE AKFLAKKLQE EEAIRRAEEE KRRKEEEEKR AAEVAQQQKK VKEKEKKLLR 360 KERTRLRTLS GPIISQSLLD LSEEDVENLC SSFDIEQLRN VCDKMEGKTG LERAKVLKDA 420 QGCSNSERKH QEVKKTGQQN GSTTANTSVP LSSLQKKERP WGKDEIELLR KGMQKYPKGT 480 SRRWEVISEY IGTERSVEEI LKATKTILLQ KPDSAKAFDS FLEKRKPAQS IASPLSTREE 540 LEGASTQKSE DNAAVNGNLD MPSGRNVNSQ TPNDSSANGV PSSSEQDDWS AVQERALVQA 600 LKTFPKETSQ RWERVAAAVP GKTVNQCKKK FTSMKENFRN RKSAA

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

MTVQANLRLL TYSQEIVDGQ PIYVSSNCLP IKASKYEPAG HSFHYAALKL LGCEDDEVSD  60
DNEQTADDAE QKYAPSFDSY SSKGKKKSGG STQQDHYALL GLSHLRYLAT EDQIKKSYRE  120
TALKYHPDKQ AALILAEETE SAKQAKKDEI ESHFKSIQEA YEVLIDPVKR RIYDSTDEFD  180
DEIPTDCAPQ DFFKVYGPAF MRNGRWSVNQ SVPSLGDDKT PLKEVDDFYN FWYSFKSWRE  240
FPHADEFDIE QAESRDHKRW MERQNAKLTE KARKEEYARI RTLVDNAYKR DPRIQRRKEE  300
EKAEKQRKKE AKFLAKKLQE EEAIRRAEEE KRRKEEEEKR AAEVAQQQKK VKEKEKKLLR  360
KERTRLRTLS GPIISQSLLD LSEEDVENLC SSFDIEQLRN VCDKMEGKTG LERAKVLKDA  420
QGCSNSERKH QEVKKTGQQN GSTTANTSVP LSSLQKKERP WGKDEIELLR KGMQKYPKGT  480
SRRWEVISEY IGTERSVEEI LKATKTILLQ KPDSAKAFDS FLEKRKPAQS IASPLSTREE  540
LEGASTQKSE DNAAVNGNLD MPSGRNVNSQ TPNDSSANGV PSSSEQDDWS AVQERALVQA  600
LKTFPKETSQ RWERVAAAVP GKTVNQCKKK FTSMKENFRN RKSAA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	331	354	KRRKEEEEKRAAEVAQQQKKVKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein