PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136697.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 309aa    MW: 33344.1 Da    PI: 4.7655
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136697.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.46e-16228263134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg
  XP_022136697.1 228 CTHCGISSksTPMMRRGPAGPRTLCNACGLKWANKG 263
                     *****99999**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MPESNFQDAM YGSGAMNNGG RDLDNIQNRV GDEEDDVTGG EESIDNPQMR FEDSGGISGS  60
VSVMNRVQDI VPATYVSGSD YNPLTGNGAD QLTLSFRGEV YAFDSVSPDK VWFSVQAVLL  120
LLGGYEIPSG IPAVGNVPIN QQGTDGLPIR SVQPQRAASL SRFREKRKER CFEKKIRYNV  180
RKEVALRMQR KKGQFISSKA ISDGVGSSSV LAQTLDSGQD DGMLETSCTH CGISSKSTPM  240
MRRGPAGPRT LCNACGLKWA NKGILRDLSK VSNVGIQEPF VKETEQSDGE ANESDTGINV  300
DILSSNGDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-60GATA family protein