PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022136477.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 222aa MW: 25602.8 Da PI: 6.2651 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.5 | 6.2e-20 | 58 | 112 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t++q++ Le+ F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ XP_022136477.1 58 KKRKLTAQQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKN 112 56799************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 118.1 | 4.8e-38 | 58 | 149 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkr+l+++qv+lLE++F +e+kLe+erK +la+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+ +++++ e++rLe+e +L+e+l+e XP_022136477.1 58 KKRKLTAQQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSHLKKLHESVVVEKCRLETEILNLKEQLSE 149 9****************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MNHQITEEHQ AVQISQLYTG LYIQMAPQQG NSGESKPRRR RKKNRGSSES EAAAAAAKKR 60 KLTAQQVHLL ETNFGSEHKL ESERKDRLAS ELGLDPRQVA VWFQNRRARW KNKKLEEEYS 120 HLKKLHESVV VEKCRLETEI LNLKEQLSEA EKEKERLMRA DGPLSSSPSP SMSMEAVDPT 180 SYSCLGEFGS YELEDVFYYM PEAESDNTCI YGMEMEWPNP YI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 61 | RRRRKKNRGSSESEAAAAAAKKRK |
2 | 39 | 62 | RRRRKKNRGSSESEAAAAAAKKRK |
3 | 40 | 63 | RRRRKKNRGSSESEAAAAAAKKRK |
4 | 41 | 64 | RRRRKKNRGSSESEAAAAAAKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 1e-59 | HD-ZIP family protein |