PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136403.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 283aa MW: 31893.4 Da PI: 7.2203

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.6	2.2e-13	108	159	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+++P++ + ++ + a+i+ +++++k+L+ XP_022136403.1 108 QRMTHIAVERNRRKQMNEYLSMLRTMMPSS---YTQRGDQASIVGGTINFVKELE 159 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MVLGLESVAF QQDLIACGWK DLQPMGSGEI LRSFVYGGFG ENDCGGGGGA EILNTPNWGH 60 SSPNSASFPE YNCALNKRST EGDPAAKRGR RKRRRGKMVK NSEEIENQRM THIAVERNRR 120 KQMNEYLSML RTMMPSSYTQ RGDQASIVGG TINFVKELEQ LVQCLEAEKQ THNFFSGRDS 180 VNSAAENRAM TVDVEVTVIE SYANIKMIAE KRPRQLLKVV VELHSLHLLV LHINVTTIRE 240 MVLYYFSVKI EDDCKLSTVG EITAAVHEMF GRIHVENFVE LYI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	87	95	KRGRRKRRR
2	91	95	RKRRR
3	91	98	RKRRRGKM
4	109	120	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	9e-51	bHLH family protein