PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136261.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TALE

Protein Properties

Length: 346aa MW: 38586.4 Da PI: 7.1136

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.8e-09	274	307	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps++++ LA+++gL+ +q+ +WF N+R ++ XP_022136261.1 274 WPYPSEAQKVALAESTGLDLKQINNWFINQRKRH 307 58*****************************885 PP
2	ELK	39.4	1.2e-13	227	248	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ XP_022136261.1 227 ELKGQLLRKYSGYLGSLKQEFL 248 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MERGGSSGSS GGSSFMAGFG ENNNNSSSSG ISSMVMMSSS SNNNSQILDN NNNNVNNKLF 60 VPLSWSATST AQRVSAFVPQ PPHNNSNHNL QNSCRAKIMA HPLFPRLLAA YVNCQKVGAP 120 PEVVARLEQA CAVAGGSCRA TARGDDPALD QFMEAYCEML SKYEQELSKP FKEAMLFFSR 180 IESQLKALAV SSSTSDGCEL VGQSECSKEV EVDMNENYID PQAEEKELKG QLLRKYSGYL 240 GSLKQEFLKK KKNGKLPKEA RQELLDWWSR HYKWPYPSEA QKVALAESTG LDLKQINNWF 300 INQRKRHWKP SEDMQFVVMD AAHPHYYLDN VICNNPFSMD CSSTLF

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MERGGSSGSS GGSSFMAGFG ENNNNSSSSG ISSMVMMSSS SNNNSQILDN NNNNVNNKLF  60
VPLSWSATST AQRVSAFVPQ PPHNNSNHNL QNSCRAKIMA HPLFPRLLAA YVNCQKVGAP  120
PEVVARLEQA CAVAGGSCRA TARGDDPALD QFMEAYCEML SKYEQELSKP FKEAMLFFSR  180
IESQLKALAV SSSTSDGCEL VGQSECSKEV EVDMNENYID PQAEEKELKG QLLRKYSGYL  240
GSLKQEFLKK KKNGKLPKEA RQELLDWWSR HYKWPYPSEA QKVALAESTG LDLKQINNWF  300
INQRKRHWKP SEDMQFVVMD AAHPHYYLDN VICNNPFSMD CSSTLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-110	TALE family protein