PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022136148.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 86aa MW: 9787.8 Da PI: 4.8384 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.5 | 6.1e-08 | 11 | 57 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT+ + + +a + + + +W +a+ +g +t++++k ++q + XP_022136148.1 11 AWTAMQNKAFEEALAVYDQDtpeRWLNVAKAVG-EKTEEEVKRHYQLL 57 8*****************99*************.9**********975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 86 aa Download sequence |
MASMSSRGSS AWTAMQNKAF EEALAVYDQD TPERWLNVAK AVGEKTEEEV KRHYQLLVED 60 VKHIESGHVP FPYQTSNDDD FPTKRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G39250.1 | 9e-34 | MYB_related family protein |