PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136017.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 439aa    MW: 49833.2 Da    PI: 8.3251
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136017.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.71.5e-06831126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    +kt+lC  +++ G C++ ++C+FaHg
  XP_022136017.1  8 FKTKLCVLYQK-GRCSR-PSCSFAHG 31
                    69*********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MMVGRKLFKT KLCVLYQKGR CSRPSCSFAH GSAELRRFAG GGGAYNGRRE YRGSDLRHKL  60
DNRHSPLQER DSRGRHGPRE YSSSWSLERQ SDRKRRKKEH GDSHNDYSGS LRISDRSDER  120
DREGKITSST SRDILEGQLN KMQADIEMAE HHKHQAEVYL EEKIQEVDSL TSRIQELESQ  180
LYKEREECKR IKSKIKKFVK AHNRYTRIQD ELKRSEARFQ HLGDQLASDV SKIGANEEDS  240
SINIVSDGED PGYHAASPFR DLQKDASSSK KKMHVIQDIA ENSKQADLIK GSKEAVSRFK  300
RFSRWNAHPA QSLYSKIETV GNKINDLIPT ANESKQKRGK TSSSVLTADK IRGLESGVVV  360
PLTSMAAHAV DEDVDIELEV NNEVNETRGN SKEVASGSLP FLPPPPPPIR ENNHSRYEGE  420
DQNVDVEVLD EERSHLDDA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19399RKRRKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21810.15e-50C3H family protein