PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136006.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 766aa    MW: 83001.6 Da    PI: 6.0728
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.94.6e-2095150156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++++e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_022136006.1  95 KKRYHRHTQHQIQQMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 150
                     688999***********************************************999 PP
2START213.57.8e-672895091206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++elv++a+ +ep+W +        +n+de++++f+++ +     ++ ea+ras+vv+m++ +lve l+d++ qW+  +     +  tl
  XP_022136006.1 289 ELAVAAMEELVRMAQMGEPLWITGLdgstAVLNEDEYIRTFPRGIGpkpsgFTCEASRASAVVIMNHINLVEMLMDVN-QWSSVFSgivsRGVTL 382
                     57899******************999888899***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m++elq++splvp R+++fvRy++q+g+g w++vdvS+d+ ++ p      R++++pSg+li++++ng+skvtwvehv
  XP_022136006.1 383 EVLSTGvagnynGALQVMTSELQVPSPLVPtRESYFVRYCKQHGEGNWAVVDVSLDNLRPAPA----LRCRRRPSGCLIQEMPNGYSKVTWVEHV 473
                     ************************************************************995....**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h l+++lv+sg+a+gak+w atl+rqce+
  XP_022136006.1 474 EVDDRGVHTLYNQLVSSGHAFGAKRWIATLDRQCER 509
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 766 aa     Download sequence    
MPAGMMIPAR NAPSMIGRNG NNVGVFGSPA SLVLGQGNMM EGGQLQGLDM GGNALGESDF  60
GRMREAEDFD SVTKSSSENH EAASGDDQDH NRPKKKRYHR HTQHQIQQME AFFKECPHPD  120
DKQRKELSRE LGLEPLQVKF WFQNKRTQMK THHERHENTQ LRTENEKLRA DNMRYREALS  180
NATCPNCGGP TAIGEMSFDE HHLRLENSRL REEIDRISAI AAKYVGKPVS NYPTLLSPSI  240
PSRPLDLGMG SYGGHDSGIG GGGGEMYGAA DLLRSISAPS DADKPIIIEL AVAAMEELVR  300
MAQMGEPLWI TGLDGSTAVL NEDEYIRTFP RGIGPKPSGF TCEASRASAV VIMNHINLVE  360
MLMDVNQWSS VFSGIVSRGV TLEVLSTGVA GNYNGALQVM TSELQVPSPL VPTRESYFVR  420
YCKQHGEGNW AVVDVSLDNL RPAPALRCRR RPSGCLIQEM PNGYSKVTWV EHVEVDDRGV  480
HTLYNQLVSS GHAFGAKRWI ATLDRQCERL ASAMATSIPN GDAGVITNQE GRKSMLKLAE  540
RMVMSFCGGV SASTTHTWTT LSGTGADDVR VMTRKSVDDP GRPPGIVLSA ATSFWLPIPP  600
NRVFHFLRDE NSRNEWDILS NGGVVQEMAH IANGRDTGNC VSLLRVNSAN SSQSNMLILQ  660
ESSTDETASF VIYAPVDIVA INVVLNGGDP DYVALLPSGF AILPDGTAAA GEPGSGGSGS  720
LLTVAFQILV DSVPTAKLSL GSVATVNNLI ACTVERIKAS LSCDNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein