PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135755.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HB-other

Protein Properties

Length: 1740aa MW: 195640 Da PI: 5.9838

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.2	4.9e-17	19	73	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+++ + yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_022135755.1 19 KRKMKTASQLEILEKAYTVEAYPSEALRAELSVKLGLSDRQLQMWFCYRRLKDRK 73 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1740 aa Download sequence
MECSCEGEKK PPAGANKIKR KMKTASQLEI LEKAYTVEAY PSEALRAELS VKLGLSDRQL 60 QMWFCYRRLK DRKAPSVKRP RKSSPAMAGA AVANPVGGSG EKIMAGNLGY ESSSGLGMGS 120 NVYAHPVDMR LAGQRPGVAN ARIGVNSPSM KRFYESQQSI AELRAMALIE AQLGEPLRED 180 GPVLGMEFDP LPPGAFGAPI GATTNIDEKK AGQVFEVSAY KQRDVEQIEH HQISGRTLHE 240 YKFLPEQPTV KLDRHERGAS SYQYDSHANV QNMSRTQSIA SGHSFLHGHE QVSSGYFSQG 300 QMPNLNIFSQ QSRRGHLLLS SMGEHDSSLC KSSLVNISMD PEYGTHRTTQ PEYTSILSDQ 360 SVVHGNNVLW IEKKHKNDEA RIAREVEAHE KRMRKELEKQ DALRRKREEQ IRKEMERHDR 420 ERQREEERLS REKQKEEERY LREQRRETLR REKFLRRESI RAERTRQKEA LRREREAARL 480 KAANQRAIAR RMAKESMELA DDERLELMEL AVSSKGLPSI MSLDHETLEN LELFEGLGSS 540 SMAFMRPTFP PESVKMKMPF LSHPWTDSEV NVGNLLMVWK FLVTFADVLG LWPFTLDEFV 600 QAFHDHDSRL LGEVHVALLR CIIKDIEDVT RSPSAGLGSN QSSAPNPGGG HLYVVEGAYA 660 WGFDICSWQH HLNPLTWPEI LRQLALSAGF GPQLVKGGNA EPAYLRDENE QGNDVAGIIS 720 NLRNGLAAEN AVAIMHERGL SNQRRSRHRL TPGTVKFAAF HVLSLEGSKG LPVVEVADKI 780 QKSGLRDLTT SRTPEASIAA ALSRDSKLFE RTAPSTYCVR SPYRRDPGDA DAILSTARER 840 IHILKSGFLD GEDAERNDDS EVDVAEDPEV DDLGIEGNSM KEHQSHEVCP FDEMTSVTSG 900 KGSNEVRDSL EVGMENGGPY TSVLDFEGRV KGEESPIEQP IYITGSCTGQ NQEDSDVGDH 960 GEPWVKGLTE GEYSDLSVEE RLNALCSLIG VALEGNSMRT VLEERLEAAN SLKKQMLAEA 1020 QLDRRRAREE YVMQINESLN VGNKPEHKTI SSTDARHSPI PNVGEEKSEG PLDTDTGFQQ 1080 EDCSKSRNNS YPLNDDFPSE GKLLAQDVPL EADHSQFKQS VLTIEKSRSQ LKSYIGHKAE 1140 EMYVYRSLPL GQDRRCNRYW QFTSSASRNE PGNGRIFVEL HNGSWRLIDS AEGFDSLLAS 1200 LDIRGIRESH LHLMLRKLEN SFKAAVRGKI LQDIQNDSDA FDSSTSFRSE PEETGSRKTE 1260 TLKRYHDFES WMRSECFSLS ILSADKYGKK QGRQLLGICN HCQCFYSESS NHCRSCHETR 1320 RISDLYFSEH ESRCKENISI SWCSSSPLRI RLLKMLLTVI EASIPVEAFQ PSWTDFQRKT 1380 WGSRLLSSSS AEELLQILTL LENVIKRDVM RSNYETTYEL LACINPPGNS ICRSSPETVP 1440 VLSWIPLTTA AVALRLLEFD ASLSYILQQK AESHDHGSRD IKHLSNYVAV KNNQDSETAV 1500 ISNEYVKESN WIDCGVGLSR TNHRRSDCKG GHGRTRGGKS QKRSSGSRAV SGKRSTGTNR 1560 QILRQVLMWK DGQVDETGGS RCGRRSIRNR QKSASKIKFG SEGGGHPEET IHEKLELSLD 1620 NNQEWNNDQD LEQIDGSPSS SDRLLSIDDN GGVEYDDMLV DVCARSRRSG YVLASRSYDM 1680 DEDKEDDLYD DGERGNVMDG GDLYVEQYIN GEYNEESNKD LEHNMVSDEE MQSASSDYSI

Sequence ? help Back to Top

Protein Sequence Length: 1740 aa Download sequence

MECSCEGEKK PPAGANKIKR KMKTASQLEI LEKAYTVEAY PSEALRAELS VKLGLSDRQL  60
QMWFCYRRLK DRKAPSVKRP RKSSPAMAGA AVANPVGGSG EKIMAGNLGY ESSSGLGMGS  120
NVYAHPVDMR LAGQRPGVAN ARIGVNSPSM KRFYESQQSI AELRAMALIE AQLGEPLRED  180
GPVLGMEFDP LPPGAFGAPI GATTNIDEKK AGQVFEVSAY KQRDVEQIEH HQISGRTLHE  240
YKFLPEQPTV KLDRHERGAS SYQYDSHANV QNMSRTQSIA SGHSFLHGHE QVSSGYFSQG  300
QMPNLNIFSQ QSRRGHLLLS SMGEHDSSLC KSSLVNISMD PEYGTHRTTQ PEYTSILSDQ  360
SVVHGNNVLW IEKKHKNDEA RIAREVEAHE KRMRKELEKQ DALRRKREEQ IRKEMERHDR  420
ERQREEERLS REKQKEEERY LREQRRETLR REKFLRRESI RAERTRQKEA LRREREAARL  480
KAANQRAIAR RMAKESMELA DDERLELMEL AVSSKGLPSI MSLDHETLEN LELFEGLGSS  540
SMAFMRPTFP PESVKMKMPF LSHPWTDSEV NVGNLLMVWK FLVTFADVLG LWPFTLDEFV  600
QAFHDHDSRL LGEVHVALLR CIIKDIEDVT RSPSAGLGSN QSSAPNPGGG HLYVVEGAYA  660
WGFDICSWQH HLNPLTWPEI LRQLALSAGF GPQLVKGGNA EPAYLRDENE QGNDVAGIIS  720
NLRNGLAAEN AVAIMHERGL SNQRRSRHRL TPGTVKFAAF HVLSLEGSKG LPVVEVADKI  780
QKSGLRDLTT SRTPEASIAA ALSRDSKLFE RTAPSTYCVR SPYRRDPGDA DAILSTARER  840
IHILKSGFLD GEDAERNDDS EVDVAEDPEV DDLGIEGNSM KEHQSHEVCP FDEMTSVTSG  900
KGSNEVRDSL EVGMENGGPY TSVLDFEGRV KGEESPIEQP IYITGSCTGQ NQEDSDVGDH  960
GEPWVKGLTE GEYSDLSVEE RLNALCSLIG VALEGNSMRT VLEERLEAAN SLKKQMLAEA  1020
QLDRRRAREE YVMQINESLN VGNKPEHKTI SSTDARHSPI PNVGEEKSEG PLDTDTGFQQ  1080
EDCSKSRNNS YPLNDDFPSE GKLLAQDVPL EADHSQFKQS VLTIEKSRSQ LKSYIGHKAE  1140
EMYVYRSLPL GQDRRCNRYW QFTSSASRNE PGNGRIFVEL HNGSWRLIDS AEGFDSLLAS  1200
LDIRGIRESH LHLMLRKLEN SFKAAVRGKI LQDIQNDSDA FDSSTSFRSE PEETGSRKTE  1260
TLKRYHDFES WMRSECFSLS ILSADKYGKK QGRQLLGICN HCQCFYSESS NHCRSCHETR  1320
RISDLYFSEH ESRCKENISI SWCSSSPLRI RLLKMLLTVI EASIPVEAFQ PSWTDFQRKT  1380
WGSRLLSSSS AEELLQILTL LENVIKRDVM RSNYETTYEL LACINPPGNS ICRSSPETVP  1440
VLSWIPLTTA AVALRLLEFD ASLSYILQQK AESHDHGSRD IKHLSNYVAV KNNQDSETAV  1500
ISNEYVKESN WIDCGVGLSR TNHRRSDCKG GHGRTRGGKS QKRSSGSRAV SGKRSTGTNR  1560
QILRQVLMWK DGQVDETGGS RCGRRSIRNR QKSASKIKFG SEGGGHPEET IHEKLELSLD  1620
NNQEWNNDQD LEQIDGSPSS SDRLLSIDDN GGVEYDDMLV DVCARSRRSG YVLASRSYDM  1680
DEDKEDDLYD DGERGNVMDG GDLYVEQYIN GEYNEESNKD LEHNMVSDEE MQSASSDYSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein