PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135751.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HB-other

Protein Properties

Length: 1764aa MW: 198034 Da PI: 5.9685

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.2	5e-17	19	73	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+++ + yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_022135751.1 19 KRKMKTASQLEILEKAYTVEAYPSEALRAELSVKLGLSDRQLQMWFCYRRLKDRK 73 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1764 aa Download sequence
MECSCEGEKK PPAGANKIKR KMKTASQLEI LEKAYTVEAY PSEALRAELS VKLGLSDRQL 60 QMWFCYRRLK DRKAPSVKRP RKSSPAMAGA AVANPVGGSG EKIMAGNLGY ESSSGLGMGS 120 NVYAHPVDMR LAGQRPGVAN ARIGVNSPSM KRFYESQQSI AELRAMALIE AQLGEPLRED 180 GPVLGMEFDP LPPGAFGAPI GATTNIDEKK AGQVFEVSAY KQRDVEQIEH HQISGRTLHE 240 YKFLPEQPTV KLDRHERGAS SYQYDSHANV QNMSRTQSIA SGHSFLHGHE QVSSGYFSQG 300 QMPNLNIFSQ QSRRGHLLLS SMGEHDSSLC KSSLVNISMD PEYGTHRTTQ PEYTSILSDQ 360 SVVHGNNVLW IEKKHKNDEA RIAREVEAHE KRMRKELEKQ DALRRKREEQ IRKEMERHDR 420 ERQREEERLS REKQKEEERY LREQRRETLR REKFLRRESI RAERTRQKEA LRREREAARL 480 KAANQRAIAR RMAKESMELA DDERLELMEL AVSSKGLPSI MSLDHETLEN LELFEGLGSS 540 SMAFMRPTFP PESVKMKMPF LSHPWTDSEV NVGNLLMVWK FLVTFADVLG LWPFTLDEFV 600 QAFHDHDSRL LGEVHVALLR CIIKDIEDVT RSPSAGLGSN QSSAPNPGGG HLYVVEGAYA 660 WGFDICSWQH HLNPLTWPEI LRQLALSAGF GPQLVKGGNA EPAYLRDENE QGNDVAGIIS 720 NLRNGLAAEN AVAIMHERGL SNQRRSRHRL TPGTVKFAAF HVLSLEGSKG LPVVEVADKI 780 QKSGLRDLTT SRTPEASIAA ALSRDSKLFE RTAPSTYCVR SPYRRDPGDA DAILSTARER 840 IHILKSGFLD GEDAERNDDS EVDVAEDPEV DDLGIEGNSM KEHQSHEVCP FDEMTSVTSG 900 KGSNEVRDSL EVGMENGGPY TSVLDFEGRV KGEESPIEQP IYITGSCTGQ NQEDSDVGDH 960 GEPWVKGLTE GEYSDLSVEE RLNALCSLIG VALEGNSMRT VLEERLEAAN SLKKQMLAEA 1020 QLDRRRAREE YVMQINESLN VGNKPEHKTI SSTDARHSPI PNVGEEKSEG PLDTDTGFQQ 1080 EDCSKSRNNS YPLNDDFPSE GKLLAQDVPL EADHSQFKQS VLTIEKSRSQ LKSYIGHKAE 1140 EMYVYRSLPL GQDRRCNRYW QFTSSASRNE PGNGRIFVEL HNGSWRLIDS AEGFDSLLAS 1200 LDIRGIRESH LHLMLRKLEN SFKAAVRGKI LQDIQSKGEG AAGHDYNAHT YGSVTTLCAD 1260 DSDAFDSSTS FRSEPEETGS RKTETLKRYH DFESWMRSEC FSLSILSADK YGKKQGRQLL 1320 GICNHCQCFY SESSNHCRSC HETRRISDLY FSEHESRCKE NISISWCSSS PLRIRLLKML 1380 LTVIEASIPV EAFQPSWTDF QRKTWGSRLL SSSSAEELLQ ILTLLENVIK RDVMRSNYET 1440 TYELLACINP PGNSICRSSP ETVPVLSWIP LTTAAVALRL LEFDASLSYI LQQKAESHDH 1500 GSRDIKHLSN YVAVKNNQDS ETAVISNEYV KESNWIDCGV GLSRTNHRRS DCKGGHGRTR 1560 GGKSQKRSSG SRAVSGKRST GTNRQILRQV LMWKDGQVDE TGGSRCGRRS IRNRQKSASK 1620 IKFGSEGGGH PEETIHEKLE LSLDNNQEWN NDQDLEQIDG SPSSSDRLLS IDDNGGVEYD 1680 DMLVDVCARS RRSGYVLASR SYDMDEDKED DLYDDGERGN VMDGGDLYVE QYINGEYNEE 1740 SNKDLEHNMV SDEEMQSASS DYSI

Sequence ? help Back to Top

Protein Sequence Length: 1764 aa Download sequence

MECSCEGEKK PPAGANKIKR KMKTASQLEI LEKAYTVEAY PSEALRAELS VKLGLSDRQL  60
QMWFCYRRLK DRKAPSVKRP RKSSPAMAGA AVANPVGGSG EKIMAGNLGY ESSSGLGMGS  120
NVYAHPVDMR LAGQRPGVAN ARIGVNSPSM KRFYESQQSI AELRAMALIE AQLGEPLRED  180
GPVLGMEFDP LPPGAFGAPI GATTNIDEKK AGQVFEVSAY KQRDVEQIEH HQISGRTLHE  240
YKFLPEQPTV KLDRHERGAS SYQYDSHANV QNMSRTQSIA SGHSFLHGHE QVSSGYFSQG  300
QMPNLNIFSQ QSRRGHLLLS SMGEHDSSLC KSSLVNISMD PEYGTHRTTQ PEYTSILSDQ  360
SVVHGNNVLW IEKKHKNDEA RIAREVEAHE KRMRKELEKQ DALRRKREEQ IRKEMERHDR  420
ERQREEERLS REKQKEEERY LREQRRETLR REKFLRRESI RAERTRQKEA LRREREAARL  480
KAANQRAIAR RMAKESMELA DDERLELMEL AVSSKGLPSI MSLDHETLEN LELFEGLGSS  540
SMAFMRPTFP PESVKMKMPF LSHPWTDSEV NVGNLLMVWK FLVTFADVLG LWPFTLDEFV  600
QAFHDHDSRL LGEVHVALLR CIIKDIEDVT RSPSAGLGSN QSSAPNPGGG HLYVVEGAYA  660
WGFDICSWQH HLNPLTWPEI LRQLALSAGF GPQLVKGGNA EPAYLRDENE QGNDVAGIIS  720
NLRNGLAAEN AVAIMHERGL SNQRRSRHRL TPGTVKFAAF HVLSLEGSKG LPVVEVADKI  780
QKSGLRDLTT SRTPEASIAA ALSRDSKLFE RTAPSTYCVR SPYRRDPGDA DAILSTARER  840
IHILKSGFLD GEDAERNDDS EVDVAEDPEV DDLGIEGNSM KEHQSHEVCP FDEMTSVTSG  900
KGSNEVRDSL EVGMENGGPY TSVLDFEGRV KGEESPIEQP IYITGSCTGQ NQEDSDVGDH  960
GEPWVKGLTE GEYSDLSVEE RLNALCSLIG VALEGNSMRT VLEERLEAAN SLKKQMLAEA  1020
QLDRRRAREE YVMQINESLN VGNKPEHKTI SSTDARHSPI PNVGEEKSEG PLDTDTGFQQ  1080
EDCSKSRNNS YPLNDDFPSE GKLLAQDVPL EADHSQFKQS VLTIEKSRSQ LKSYIGHKAE  1140
EMYVYRSLPL GQDRRCNRYW QFTSSASRNE PGNGRIFVEL HNGSWRLIDS AEGFDSLLAS  1200
LDIRGIRESH LHLMLRKLEN SFKAAVRGKI LQDIQSKGEG AAGHDYNAHT YGSVTTLCAD  1260
DSDAFDSSTS FRSEPEETGS RKTETLKRYH DFESWMRSEC FSLSILSADK YGKKQGRQLL  1320
GICNHCQCFY SESSNHCRSC HETRRISDLY FSEHESRCKE NISISWCSSS PLRIRLLKML  1380
LTVIEASIPV EAFQPSWTDF QRKTWGSRLL SSSSAEELLQ ILTLLENVIK RDVMRSNYET  1440
TYELLACINP PGNSICRSSP ETVPVLSWIP LTTAAVALRL LEFDASLSYI LQQKAESHDH  1500
GSRDIKHLSN YVAVKNNQDS ETAVISNEYV KESNWIDCGV GLSRTNHRRS DCKGGHGRTR  1560
GGKSQKRSSG SRAVSGKRST GTNRQILRQV LMWKDGQVDE TGGSRCGRRS IRNRQKSASK  1620
IKFGSEGGGH PEETIHEKLE LSLDNNQEWN NDQDLEQIDG SPSSSDRLLS IDDNGGVEYD  1680
DMLVDVCARS RRSGYVLASR SYDMDEDKED DLYDDGERGN VMDGGDLYVE QYINGEYNEE  1740
SNKDLEHNMV SDEEMQSASS DYSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein