PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135725.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 481aa MW: 53546.2 Da PI: 5.1931

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.4	3.8e-09	423	477	1	46
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqk 46 r+ W+teE+e l+++v+++ + W++I + +Rt+ ++k++w++ XP_022135725.1 423 RLFWSTEEEEMLKEGVQKFSTTanknlPWRKILEFGRhvfdDTRTPVDLKDKWRN 477 678****************************99889**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MRTKNRRGGR SKPSRRSSAA STPSSTASPS VTDRDAPNAE DNILNEASAN ETQDVSNEVD 60 CFRKDTCIRC DESGGLLVCT EIGCPIALHE YCMSCEPTFD EEGRFYCPYC SYKKALVRAN 120 ELRRKAMVAK KALSDFIDTR MVSGGNSPQI GEAAKKKAST CGVDVNLPDH ESHLGSESLG 180 DQAVQVERNQ SNEGEDHEKT AGDARSTVGV NAENHDNPIV SNVSNSINST PEIQPLEDSM 240 NEEETREADA SGTHLVESLE DKDDGKMMEE ETLRLTDDIQ NEGIVKDRGQ PETSNAHNDE 300 EETAVDVVDH GVEREPQDNG DGGEQIQLDK EGMLENINVG SGNGDLKNET IVKKKRFKTK 360 ANRRIDLQNF SSPRKSTRIR TPEPGKNHVT KIEKVSVPRN LKLQPVSPNQ FKKLDSNGGK 420 RKRLFWSTEE EEMLKEGVQK FSTTANKNLP WRKILEFGRH VFDDTRTPVD LKDKWRNIIA 480 K

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MRTKNRRGGR SKPSRRSSAA STPSSTASPS VTDRDAPNAE DNILNEASAN ETQDVSNEVD  60
CFRKDTCIRC DESGGLLVCT EIGCPIALHE YCMSCEPTFD EEGRFYCPYC SYKKALVRAN  120
ELRRKAMVAK KALSDFIDTR MVSGGNSPQI GEAAKKKAST CGVDVNLPDH ESHLGSESLG  180
DQAVQVERNQ SNEGEDHEKT AGDARSTVGV NAENHDNPIV SNVSNSINST PEIQPLEDSM  240
NEEETREADA SGTHLVESLE DKDDGKMMEE ETLRLTDDIQ NEGIVKDRGQ PETSNAHNDE  300
EETAVDVVDH GVEREPQDNG DGGEQIQLDK EGMLENINVG SGNGDLKNET IVKKKRFKTK  360
ANRRIDLQNF SSPRKSTRIR TPEPGKNHVT KIEKVSVPRN LKLQPVSPNQ FKKLDSNGGK  420
RKRLFWSTEE EEMLKEGVQK FSTTANKNLP WRKILEFGRH VFDDTRTPVD LKDKWRNIIA  480
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	9e-07	MYB_related family protein