PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135458.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 430aa MW: 45310.8 Da PI: 7.0464

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135458.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.9e-12	229	274	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022135458.1 229 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 274 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MQPCSREMQG LNSLLNHSQI SLQDLHNDHH NHLNPAAAPP QIPPSHLHHF DPATSHDDFL 60 EQMLNTIPSC SWPDMNPPNP KSPWDLNPIN KPRELSDDAL HLDHDSAALA SKLRSHQISG 120 NSAAAKAAVM LQQQLLLNRG MTAGNGVADH GLPPMPLSLG NGDLDRSQND VVDGSCFRPP 180 NSGGSMQSHS FGAPGNGMNQ APASGSVGVS PSQPKQKVRA RRGQATDPHS IAERLRRERI 240 AERMKALQEL VPNANKTDKA SMLDEIIDYV KFLQLQVKVL SMSRLGGAAA VAPLVADVSS 300 EGGGECMQGS GAQGGRSSNG GNQTASSNDS MTVTEQQVAK LMEKDMGSAM QYLQGKGLCL 360 MPISLATAIS TSTCHSRNPM MNGGGHGHGQ HPVMGSNGEG PSSPSMSVLT VQSTSMGNGS 420 VKDAASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MQPCSREMQG LNSLLNHSQI SLQDLHNDHH NHLNPAAAPP QIPPSHLHHF DPATSHDDFL  60
EQMLNTIPSC SWPDMNPPNP KSPWDLNPIN KPRELSDDAL HLDHDSAALA SKLRSHQISG  120
NSAAAKAAVM LQQQLLLNRG MTAGNGVADH GLPPMPLSLG NGDLDRSQND VVDGSCFRPP  180
NSGGSMQSHS FGAPGNGMNQ APASGSVGVS PSQPKQKVRA RRGQATDPHS IAERLRRERI  240
AERMKALQEL VPNANKTDKA SMLDEIIDYV KFLQLQVKVL SMSRLGGAAA VAPLVADVSS  300
EGGGECMQGS GAQGGRSSNG GNQTASSNDS MTVTEQQVAK LMEKDMGSAM QYLQGKGLCL  360
MPISLATAIS TSTCHSRNPM MNGGGHGHGQ HPVMGSNGEG PSSPSMSVLT VQSTSMGNGS  420
VKDAASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	234	239	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	2e-71	bHLH family protein