PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135142.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 278aa    MW: 30278.9 Da    PI: 6.539
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135142.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.3e-11159206455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_022135142.1 159 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 206
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDPPLVNESS FSAANPSAYS LAAIWPFVGE QAGSALGLRM GSLGHNLGGF LETSTNRDGS  60
MEESTVTEQS VGGGRKRKDV SSEDESSKMV STSSANQLSN SNGKRMKVLE SRDENGGLKA  120
EVEPISADSK KPIDQSPKPS EPPKDYIHVR ARRGQATDSH SLAERARREK ISERMKILQD  180
LVPGCNKVIG KALVLDEIIN YIQSLQRQVE FLSMKLEAVN SRMNISSGIE GFTVKNIVNQ  240
PYDTAGILYG SQAAREYTQG AQPEWLHMQI GGSFERTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.12e-89bHLH family protein