PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134891.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 562aa MW: 60798.5 Da PI: 7.3128

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.5	7.6e-30	239	297	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+rs +d +++++tYeg+Hnh+ XP_022134891.1 239 NDGCQWRKYGQKIAKGNPCPRAYYRCTGApTCPVRKQVQRSIDDISILITTYEGTHNHP 297 8************************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MEAAALPKEE DRVQSSGGDE EEAATKKDVL HKVPFMADLE KPSVASASSS WKQEEERIKM 60 AKAEMREVKE ENERLKKCLD EIVKDYERLK RQFQEINQNQ NQRSEGKQTS ASTIIHDHEV 120 EEVDDMVSLT LGRFSSTSTH HNNNNIISSQ RSSNLLLDHK RVSLTGSSER NQTPSNDLVV 180 QTPPDSEPKE EDAGQTWPPS KALKTTLPPP PAEDEVSQQN PPKKARVCVR ARCDTPTLND 240 GCQWRKYGQK IAKGNPCPRA YYRCTGAPTC PVRKQVQRSI DDISILITTY EGTHNHPLPV 300 SAMAMASTTS AAASMLLSGP SSSSTSRPGI GLNPPSVANH LYLSNNSINN PKQLYFPNSS 360 LLSSNSLNHP TITLDLTSSS TSTSSSPFHK IPSTYPPKYP FTSLDFGSSQ SNLMSWNNGG 420 LIVNNNQPYN LTKNNSAIGM SSSDLTKQLP LSSNIYQACL QHMNKTSTPA PPPETIAAAT 480 KVITSDPNFQ SALVAAISSI IGGENGGEMS SYVCASSASL LSKTPSGTSS QQGSMGFQPP 540 AAVSNSKTPS SSPGDSRDNN TK

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MEAAALPKEE DRVQSSGGDE EEAATKKDVL HKVPFMADLE KPSVASASSS WKQEEERIKM  60
AKAEMREVKE ENERLKKCLD EIVKDYERLK RQFQEINQNQ NQRSEGKQTS ASTIIHDHEV  120
EEVDDMVSLT LGRFSSTSTH HNNNNIISSQ RSSNLLLDHK RVSLTGSSER NQTPSNDLVV  180
QTPPDSEPKE EDAGQTWPPS KALKTTLPPP PAEDEVSQQN PPKKARVCVR ARCDTPTLND  240
GCQWRKYGQK IAKGNPCPRA YYRCTGAPTC PVRKQVQRSI DDISILITTY EGTHNHPLPV  300
SAMAMASTTS AAASMLLSGP SSSSTSRPGI GLNPPSVANH LYLSNNSINN PKQLYFPNSS  360
LLSSNSLNHP TITLDLTSSS TSTSSSPFHK IPSTYPPKYP FTSLDFGSSQ SNLMSWNNGG  420
LIVNNNQPYN LTKNNSAIGM SSSDLTKQLP LSSNIYQACL QHMNKTSTPA PPPETIAAAT  480
KVITSDPNFQ SALVAAISSI IGGENGGEMS SYVCASSASL LSKTPSGTSS QQGSMGFQPP  540
AAVSNSKTPS SSPGDSRDNN TK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-60	WRKY family protein