PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134884.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

E2F/DP

Protein Properties

Length: 377aa MW: 42829.4 Da PI: 9.7271

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73.6	2.1e-23	19	84	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+ + +tl+++a +L v +rRRiYDi+NVLe+++++++k+kn+++w+g XP_022134884.1 19 RKQKSLGLLCSNFLRLYDRDGVHSITLDDAAVRL---GV--ERRRIYDIVNVLESVGILARKAKNQYNWIG 84 79***************999********.....****************************98 PP
2	E2F_TDP	73.6	2.1e-23	151	231	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s++ ++l+++a+ L+ + +++k+RR+YDi+NVL +++liek ++k+++rw g XP_022134884.1 151 RREKSLALLTQNFVKLFVCSKAHLISLDQAARLLLGDaqsisLMRTKVRRLYDIANVLASIHLIEKthtveTRKPAFRWLG 231 689************************************9999*********************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MANLHLPYIL PDSSSAYSRK QKSLGLLCSN FLRLYDRDGV HSITLDDAAV RLGVERRRIY 60 DIVNVLESVG ILARKAKNQY NWIGFSGLPN ALRQLKEEGL TGNRSGMDAN DHSKMWDDED 120 DTLGFSDLTS VSQKSTSVTS KSSESVRSEN RREKSLALLT QNFVKLFVCS KAHLISLDQA 180 ARLLLGDAQS ISLMRTKVRR LYDIANVLAS IHLIEKTHTV ETRKPAFRWL GLRDEVENRH 240 SRKPIPCDSN KRTFGTDITN FNLKRNKLGY ALDLNKSPNA LMEKHVKLEG CGTEVDGRDK 300 LEGNQNSKSF KFGAFCPIEV RASKNGEAKR DHNREGLAST YHPRYQNEAL RELFSHYMEA 360 WRTWYSETVN RSSLDIS

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MANLHLPYIL PDSSSAYSRK QKSLGLLCSN FLRLYDRDGV HSITLDDAAV RLGVERRRIY  60
DIVNVLESVG ILARKAKNQY NWIGFSGLPN ALRQLKEEGL TGNRSGMDAN DHSKMWDDED  120
DTLGFSDLTS VSQKSTSVTS KSSESVRSEN RREKSLALLT QNFVKLFVCS KAHLISLDQA  180
ARLLLGDAQS ISLMRTKVRR LYDIANVLAS IHLIEKTHTV ETRKPAFRWL GLRDEVENRH  240
SRKPIPCDSN KRTFGTDITN FNLKRNKLGY ALDLNKSPNA LMEKHVKLEG CGTEVDGRDK  300
LEGNQNSKSF KFGAFCPIEV RASKNGEAKR DHNREGLAST YHPRYQNEAL RELFSHYMEA  360
WRTWYSETVN RSSLDIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-103	E2F/DP family protein