PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134784.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WOX

Protein Properties

Length: 289aa MW: 33486.3 Da PI: 9.5109

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134784.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.1	5.3e-22	81	140	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ XP_022134784.1 81 SRWNPTAEQLRILEELYRRgTRTPSADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 140 8***************99************************************97 PP
2	Wus_type_Homeobox	118.4	3.1e-38	79	142	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+Pt+eQ++iLeely++G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ XP_022134784.1 79 SSSRWNPTAEQLRILEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 142 579***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MWTLGYDDNG GEFSFSEPFN GGRKLRPLVP RPLPASLRVN GANFCAQYYH LASYLNLNEQ 60 SKRELNDSSS SSSPAVVVSS SRWNPTAEQL RILEELYRRG TRTPSADQIQ HITAQLRRYG 120 KIEGKNVFYW FQNHKARERQ KRRRQTAADQ TKHSGTEKGY EIQQTKTNCT TTLSQEREER 180 RRRECVERDG ELVINPRRKT LHHRNGLVDE PYRENSNGLV RDGCETTTLQ LFPLRSTKLC 240 KNENDSEREG RQEDQLGIMS DSDNMTVLKT SPFSPTTTFQ FFEFLPLKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	184	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	3e-42	WOX family protein