PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134750.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 495aa MW: 56997.7 Da PI: 6.652

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.3	3.6e-13	227	263	11	48
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 llv++v+q+G + W+ Ia +++ gR +kqc++rw+++l XP_022134750.1 227 LLVQLVEQHGLRKWSHIAIMLP-GRIGKQCRERWHNHL 263 89******************.***********97 PP
2	Myb_DNA-binding	55.5	1.3e-17	269	311	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd l++a+++ G++ W+ Ia++++ gRt++++k++w+ XP_022134750.1 269 KDTWSEEEDRVLIEAHTEIGNK-WAEIAKRLP-GRTENSIKNHWN 311 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MELESNLREN LTSDQLVSSE NYAQICKKEE FPFQVFASRG NYLQEFHHLD HFHPVGSSSN 60 PVIEDENLCN FDPFNPYSYG SSSNNNIVVE DHLYEYNKVC ADQNGGCGQV MDNFQSGDCY 120 NFHQRNHIDV MGLERNSIIP SNFPEIKPVN FIVPDEVSCI TSGNARIQKA IMNKNATFPS 180 LLRTSKGRKK PTVIKGQWTV EEDRYKFFQT SQLISVHIFL LNVNNRLLVQ LVEQHGLRKW 240 SHIAIMLPGR IGKQCRERWH NHLRPDIKKD TWSEEEDRVL IEAHTEIGNK WAEIAKRLPG 300 RTENSIKNHW NATKRRQYSK RKCRSKYPRC SLLQDYIKSL NLDSNTSRHQ RKSSAATAAN 360 NAKSKSVDHN QAPTTDFCPN DWPVPNFDFK DEAEFYFDDN FFQEGCSINS LMEDIAGASV 420 DDANNYDRER PNAAVESVDY HQRSKVEMQK LQYCDSYVGE TAAPAPAAAG MEFEVKKELD 480 LVEMMTRVNE VNKMK

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MELESNLREN LTSDQLVSSE NYAQICKKEE FPFQVFASRG NYLQEFHHLD HFHPVGSSSN  60
PVIEDENLCN FDPFNPYSYG SSSNNNIVVE DHLYEYNKVC ADQNGGCGQV MDNFQSGDCY  120
NFHQRNHIDV MGLERNSIIP SNFPEIKPVN FIVPDEVSCI TSGNARIQKA IMNKNATFPS  180
LLRTSKGRKK PTVIKGQWTV EEDRYKFFQT SQLISVHIFL LNVNNRLLVQ LVEQHGLRKW  240
SHIAIMLPGR IGKQCRERWH NHLRPDIKKD TWSEEEDRVL IEAHTEIGNK WAEIAKRLPG  300
RTENSIKNHW NATKRRQYSK RKCRSKYPRC SLLQDYIKSL NLDSNTSRHQ RKSSAATAAN  360
NAKSKSVDHN QAPTTDFCPN DWPVPNFDFK DEAEFYFDDN FFQEGCSINS LMEDIAGASV  420
DDANNYDRER PNAAVESVDY HQRSKVEMQK LQYCDSYVGE TAAPAPAAAG MEFEVKKELD  480
LVEMMTRVNE VNKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	8e-89	MYB family protein