PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022134641.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ARF
Protein Properties Length: 845aa    MW: 93658.6 Da    PI: 6.6044
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022134641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.91.9e-23137238199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_022134641.1 137 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGSEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 228
                     99*****************************7333.34459************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_022134641.1 229 GELRVGVRRA 238
                     99*****996 PP
2Auxin_resp120.51.3e-39263345183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha+st+++F+v+Y+Pr+s+seF+v+++++++++k+++++GmRfkm+fe+e+++e+r++Gt++g +d+dp rW++SkWr+Lk
  XP_022134641.1 263 AWHAISTGTMFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKRWKDSKWRCLK 345
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 845 aa     Download sequence    
MASSEVSINP NSAKDPDPPI ALSARDAEIA LYTELWNACA GPLVSVPREK ERVFYFPQGH  60
IEQVEASTNQ VADQQMPVYN LPSKILCRVI NVHLKAEPDT DEVFAQITLL PEANQDEDAV  120
DKEPPPPPPR RFHVHSFCKT LTASDTSTHG GFSVLRRHAD ECLPPLDMSR QPPTQELVAK  180
DLHGSEWRFR HIFRGQPRRH LLQSGWSVFV SSKRLVAGDA FIFLRGENGE LRVGVRRAMR  240
QHGNVPSSVI SSHSMHLGVL ATAWHAISTG TMFTVYYKPR TSPSEFIVPY DQYMESIKKS  300
YTIGMRFKMR FEGEEAPEQR FTGTIIGCED ADPKRWKDSK WRCLKVRWDE TSTISRPERV  360
SPWKIEPALA PPALNPIPIT RPKRPRSNMV PTSPDSSVLT REGSSRLAVD PSPASAFTRV  420
LQGQEFSTLR GNFGDGNDPD AAEKSVMWPP SLDDEKIDVV STPNKHGADS WMPPGRSETT  480
YADLLSGFGT NLDSPHGVRA AMGDSAVVAA SSIRKHAMDQ DGKFNFLGGR SWSVMSSGGL  540
SLNLVDSSQK AHIQGGDLPY QVRGNATFNG FGDHTMAHCH GVEHSRGNWF MPPPSSHFDY  600
PVHSTELMSK PMLFQNQDVL KPKDGNCKLF GISLIKNPAI QAIPDPAGFN RNMMNEADVV  660
HLNTHQMHSN ESGLKSELSK GSKLVDKSLA VIEVDKSQQT CTQNLKDAQS KSQGGSTRSC  720
TKVHKQGIAL GRSVDLSKFN NYDELVAELD ELFEFGGELL APKKNWLIVY TDDEGDMMLV  780
GDDPWQEFCG MVRKIFIYTR EEVQKMNPAG SLNLKRDENP SVGEGEEAKE IKSQAVPSMS  840
APESS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14752PREKER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein