PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134589.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 362aa MW: 40917.2 Da PI: 6.7903

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.5	4.8e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++ +G g+W+++++ g+ R++k+c++rw +yl XP_022134589.1 14 KGLWSPEEDEKLFNYITTFGVGCWSSVPKLAGLERCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	45.9	1.3e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_022134589.1 67 RGMFSQQEEDLIISLHQVLGNR-WAQIAAQLP-GRTDNEIKNFWNS 110 788*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGRNSCCLKP KLRKGLWSPE EDEKLFNYIT TFGVGCWSSV PKLAGLERCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIS LHQVLGNRWA QIAAQLPGRT DNEIKNFWNS SLKKKLMKQG 120 IDPATHKPLE ENMEAMNDHK KSYTEKQRVK VAHHLQGDIS NITISSEASF LTDSNHYYKQ 180 TEDSAQHFVN KIEFDSVSYM GGEYNNSQFA ATQYQPNTTR SCDHNYFYSN SSFGLPSYSS 240 SEHGNMSRTD FSENSASGLS SFFINEVKES SSNSSVVSNY SGYHVNNPGE NNGGFSWEGE 300 NKLENLFQFQ TNEVKNLEFK GSSGEETKII QTQNNSASFG SYPLMSMSEN VTGGSFGVFH 360 HI

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGRNSCCLKP KLRKGLWSPE EDEKLFNYIT TFGVGCWSSV PKLAGLERCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDLIIS LHQVLGNRWA QIAAQLPGRT DNEIKNFWNS SLKKKLMKQG  120
IDPATHKPLE ENMEAMNDHK KSYTEKQRVK VAHHLQGDIS NITISSEASF LTDSNHYYKQ  180
TEDSAQHFVN KIEFDSVSYM GGEYNNSQFA ATQYQPNTTR SCDHNYFYSN SSFGLPSYSS  240
SEHGNMSRTD FSENSASGLS SFFINEVKES SSNSSVVSNY SGYHVNNPGE NNGGFSWEGE  300
NKLENLFQFQ TNEVKNLEFK GSSGEETKII QTQNNSASFG SYPLMSMSEN VTGGSFGVFH  360
HI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	1e-79	MYB family protein