PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022134454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 278aa MW: 32068.5 Da PI: 4.375 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63 | 4.4e-20 | 65 | 118 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e+++eLAk+lgL+ rqV vWFqNrRa++k XP_022134454.1 65 KKRRLTQEQVNLLENSFEAENKLEPERKTELAKRLGLQPRQVAVWFQNRRARWK 118 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 125.8 | 2e-40 | 64 | 156 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl++eqv+lLE+sFe+e+kLeperK+ela++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk +y + +++ + + ke+e+L++e+++ XP_022134454.1 64 EKKRRLTQEQVNLLENSFEAENKLEPERKTELAKRLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKLSYGSFRSNFDFIVKENERLKAEVAS 156 69*****************************************************************99999998888888888888888764 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 278 aa Download sequence |
MMSDGLIFNQ SPVQGNLLFF GSEDSILRGP RFTMGMDETS KRRSFFSSPD ELFDDDYYDD 60 QPPEKKRRLT QEQVNLLENS FEAENKLEPE RKTELAKRLG LQPRQVAVWF QNRRARWKTK 120 QLERDYDLLK LSYGSFRSNF DFIVKENERL KAEVASLTEK LQAKEVVESS FQAKKPEPIL 180 EDQLLVPVVQ HSMKIEDHHS CRSNGSAVLD EDGPQLLDSG DSYLLRNDYD GCVLPVFGAN 240 SEEEDGSDDG QGYFSDVYTA ADLQTHEVEP LTWWDWTS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 113 | 121 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G01470.1 | 2e-83 | HD-ZIP family protein |