PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022134366.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 842aa    MW: 92611.9 Da    PI: 6.1408
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022134366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.36.2e-192280357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022134366.1 22 KYVRYTPEQVEALERLYYECPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 80
                    5679*****************************************************97 PP
2START179.81.5e-561663732204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d + W ++++++++l+v+s+g  g+++l 
  XP_022134366.1 166 IAEETLAEFLSKATGTAVEWVQLPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDWPSWFRDCRAVDVLNVLSTGngGTIELL 259
                     7899******************************************************.9999999999************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_022134366.1 260 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 354
                     *******************************************9988899********************************************* PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     ks++  ++k+++a+l+ ++
  XP_022134366.1 355 KSSTLLAQKNTMAALRLLR 373
                     ***************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 842 aa     Download sequence    
MMAVTSGCKD AANKMGSVDN GKYVRYTPEQ VEALERLYYE CPKPSSMRRQ QLIRECPILS  60
NIEPKQIKVW FQNRRCREKQ RKEASRLQTV NRKLTAMNRL LMEENDRLQK QVSQLVYENS  120
YFRQQTQNAT LATTDTSCES VVTSGQQHLT PPHPPKDASP AGLLSIAEET LAEFLSKATG  180
TAVEWVQLPG MKPGPDSIGI VAISHGCTGV AARACGLVGL EPTRVAEILK DWPSWFRDCR  240
AVDVLNVLST GNGGTIELLY MQLYAPTTLA PARDFWLLRY TSVLEDGSLV VCERSLNNTQ  300
NGPSMPPVQN FVRAEMLPSG YLIRPCEGGG SIIHIVDHMD LEPWSVPEVL RPLYKSSTLL  360
AQKNTMAALR LLRQISQEVS QPNVTGWGRR PAALRALSQR LSRGFNEAVN GFTDEGWSLL  420
ESDGIDDVTL LVNLSHGKTM MGANISYSNG FPSMSNAVLC AKASMLLQNV TPAMLIRFLR  480
EHRSEWADSS IDAYSAAAIK TGQCGLPGSH AGTFGGQVIL PLAQTVEHEE FMEVIKFENV  540
GHFRDDMLMP GDIFLLQLCN GVDENAVGTS AELIFAPIDA SFSDDAPILP SGFRIIPLDS  600
GMDASSPNRT LDLASALDVG PAGNKASGDY AGQSGKSKSV MTIAFQFVFD VHLQDNVAAM  660
ARQYVRSIIA SVQRVALALS PSQFGPHSNL QTPAGTPEAQ TLARWICQSY RCYMGMELLK  720
NEGRETILKS LWHHSDAVMC CSSKALPNFT FANQAGLDML ETTLVALQDI TLEKIFDDNG  780
KKTLASEFPR IMQQGFICLQ GGVCLSSMGR AVSYEKAVAW KVLNEEENPH CICFMFMNWS  840
FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0HD-ZIP family protein