PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134348.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

LBD

Protein Properties

Length: 292aa MW: 32875.9 Da PI: 5.343

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	131.6	3.2e-41	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rr+C+kdC+lapyfpa+qpk f+n+h+lFG+ n++k+l+++++++++++m+s++ye+++rar Pv+G++gvi++l+ q++q++ el XP_022134348.1 10 ACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILRQVHPSQKDETMTSIIYESNMRARFPVHGCCGVIWHLHYQVQQAADELR 104 7*********************************************************************************************9 PP DUF260 96 llkee 100 ++k++ XP_022134348.1 105 QVKTR 109 99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MTIKGGTSQA CAACKYQRRR CSKDCALAPY FPADQPKMFQ NAHRLFGVCN IMKILRQVHP 60 SQKDETMTSI IYESNMRARF PVHGCCGVIW HLHYQVQQAA DELRQVKTRL AMVKEQFQNQ 120 MNNNVVGGGP LEGIVDASYP IYTQQQPQYN GGLMVNQMTG DGSDFFGNGN NGGIYEDDNN 180 GLMLKELRIQ QHYNDNYGIN ISNVESMLMQ SNLIPTVQGY PLQQEMEISH DYDEIPFDTI 240 ADDRQSYIES KEGCDSSAES TFKDVSESSA EYVSRIELKN AAACFSLTSH VK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	3e-45	LBD family protein