PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134320.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 1543aa MW: 171437 Da PI: 6.6806

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134320.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.6	0.0017	1452	1475	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +Cp Cgk+Fs++ + + H+r+H XP_022134320.1 1452 QCPheGCGKRFSSHKYAMLHQRVH 1475 69999*****************99 PP
2	zf-C2H2	11.1	0.0012	1511	1537	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ Cg sF+ s++ rH r+ H XP_022134320.1 1511 YKCKveGCGLSFRFVSDYSRHRRKtgH 1537 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1543 aa Download sequence
MGGVEIPKWL KGLPFAPEFR PTDTEFADPI AYISKIEKEA SAFGICKIIP PFPKPSKKYV 60 ISNLNKSLSR STELSPPNVC PSSKLGSADG ANEGEVRAVF TTRHQELGQS VKKTKGVVQN 120 PQFGVHKQVW QSGEKYTLEK FESKSKVFAR SVLSGIKEPS PLVVESLFWK AASGKPIYIE 180 YANDVPGSAF GEPRGKFRYF HRRRRKRNYY HRSKERSSEL RTGEMGTLTD SLSLDSAGTS 240 PRNDLNTSSE ILKASTSTVP SEDTSHNSRG KSSDSCINME GTAGWRLSNS PWNLQVIARS 300 PGSLTRYMPD DIPGVTSPMV YIGMLFSWFA WHVEDHELHS MNFLHVGSPK TWYSIPGDHA 360 FAFEEVVRTQ AYGGSVDHLA ALTLLGEKTT LLSPETVIAS GIPCCRLIQN PGEFVVTFPR 420 AYHVGFSHGF NCGEAANFGT PQWLSVAKDA AVRRAAMNYL PMLSHQQLLY LLTMSFVSRV 480 PRSLLPGVRS SRLRDRQKEE REFMVKKGFV EDILRENNML SVLLEKESSC RAVLWNPDML 540 PYSSNSQVAT NSAVATSRKE NISCNHTESI DGNDKNMQNF MDEMTLDLDT VNDIYLESDD 600 LSCDFQVDSG TLACVACGIL GFPFMSVVQP SEKAARELSA DNLSIHKRGG VFGPKDAHDS 660 PDFGGTHPDS TSVPDVNCLS KNLSVASIPK FDKGWSTFGK FLRPRSFCLQ HAVDIIELLK 720 NKGGANILVI CHSDYHKIKA NAVAIAEEIG NHFVYNEVRL DIASEEDLRL IDLAVDVERN 780 ECREDWTSRL GINLRHCVKV RKSSPTKQVQ HALELGGLFL NRNHGFDLSP INWPSKKSRS 840 KKISRPRYYK PFQSMPLKDE VLGKRSDCKI AKREEKVFQY YRRNKKSGNS KGVGSATQPV 900 SSGDSIDLCN MRTFRSNTSE LAIPGPIGTT NQQNAVLQDR GNTNSDPASS MVADSICAVV 960 GRMTEPRIEN CTPEVVDVNG ESCHLPVDTS GMQQKIMTTS DTSEPNEKAV LPSFTCPHVN 1020 AINESEMHKE QEIVGSCNNT NQVCDIASEG QSHALADVGL DETSSIHFES SKVMMDNADV 1080 RNLNCEACDG TTKDDDAEQE IEIANRLKDV EEDSCSLIPI KQQHCVATEC DSQLGHLEDR 1140 IEQEMEPTCR SNESEPILVN TGTASAATSH SRDENSEVPG VGCEAPNLCN AVTSVDLVNN 1200 CQIDADVETQ SVSGVVVQSK TQQSSCLADE RSFENLGSQE DKEHLSDIEM RTEPRSLVNE 1260 PGSNSCILGE GRPMDVEASG KEACDRENLT GGMTPDDAME CANMSGNQHV DDPSPITLET 1320 HDVAEICSSK HNEQGKNTRN LKSNPSSDVE KRRKRKREEE LIIENGFSSC DFIRSPCEGL 1380 RPRVGKNLTS RTGADVVSVQ EKPERERVRK LPDALSPKRK KEIRKGSFKC DLEGCRMSFE 1440 TRAELALHKR NQCPHEGCGK RFSSHKYAML HQRVHDDDRP LKCPWKGCSM SFKWAWARTE 1500 HIRVHTGERP YKCKVEGCGL SFRFVSDYSR HRRKTGHYID QPV

Sequence ? help Back to Top

Protein Sequence Length: 1543 aa Download sequence

MGGVEIPKWL KGLPFAPEFR PTDTEFADPI AYISKIEKEA SAFGICKIIP PFPKPSKKYV  60
ISNLNKSLSR STELSPPNVC PSSKLGSADG ANEGEVRAVF TTRHQELGQS VKKTKGVVQN  120
PQFGVHKQVW QSGEKYTLEK FESKSKVFAR SVLSGIKEPS PLVVESLFWK AASGKPIYIE  180
YANDVPGSAF GEPRGKFRYF HRRRRKRNYY HRSKERSSEL RTGEMGTLTD SLSLDSAGTS  240
PRNDLNTSSE ILKASTSTVP SEDTSHNSRG KSSDSCINME GTAGWRLSNS PWNLQVIARS  300
PGSLTRYMPD DIPGVTSPMV YIGMLFSWFA WHVEDHELHS MNFLHVGSPK TWYSIPGDHA  360
FAFEEVVRTQ AYGGSVDHLA ALTLLGEKTT LLSPETVIAS GIPCCRLIQN PGEFVVTFPR  420
AYHVGFSHGF NCGEAANFGT PQWLSVAKDA AVRRAAMNYL PMLSHQQLLY LLTMSFVSRV  480
PRSLLPGVRS SRLRDRQKEE REFMVKKGFV EDILRENNML SVLLEKESSC RAVLWNPDML  540
PYSSNSQVAT NSAVATSRKE NISCNHTESI DGNDKNMQNF MDEMTLDLDT VNDIYLESDD  600
LSCDFQVDSG TLACVACGIL GFPFMSVVQP SEKAARELSA DNLSIHKRGG VFGPKDAHDS  660
PDFGGTHPDS TSVPDVNCLS KNLSVASIPK FDKGWSTFGK FLRPRSFCLQ HAVDIIELLK  720
NKGGANILVI CHSDYHKIKA NAVAIAEEIG NHFVYNEVRL DIASEEDLRL IDLAVDVERN  780
ECREDWTSRL GINLRHCVKV RKSSPTKQVQ HALELGGLFL NRNHGFDLSP INWPSKKSRS  840
KKISRPRYYK PFQSMPLKDE VLGKRSDCKI AKREEKVFQY YRRNKKSGNS KGVGSATQPV  900
SSGDSIDLCN MRTFRSNTSE LAIPGPIGTT NQQNAVLQDR GNTNSDPASS MVADSICAVV  960
GRMTEPRIEN CTPEVVDVNG ESCHLPVDTS GMQQKIMTTS DTSEPNEKAV LPSFTCPHVN  1020
AINESEMHKE QEIVGSCNNT NQVCDIASEG QSHALADVGL DETSSIHFES SKVMMDNADV  1080
RNLNCEACDG TTKDDDAEQE IEIANRLKDV EEDSCSLIPI KQQHCVATEC DSQLGHLEDR  1140
IEQEMEPTCR SNESEPILVN TGTASAATSH SRDENSEVPG VGCEAPNLCN AVTSVDLVNN  1200
CQIDADVETQ SVSGVVVQSK TQQSSCLADE RSFENLGSQE DKEHLSDIEM RTEPRSLVNE  1260
PGSNSCILGE GRPMDVEASG KEACDRENLT GGMTPDDAME CANMSGNQHV DDPSPITLET  1320
HDVAEICSSK HNEQGKNTRN LKSNPSSDVE KRRKRKREEE LIIENGFSSC DFIRSPCEGL  1380
RPRVGKNLTS RTGADVVSVQ EKPERERVRK LPDALSPKRK KEIRKGSFKC DLEGCRMSFE  1440
TRAELALHKR NQCPHEGCGK RFSSHKYAML HQRVHDDDRP LKCPWKGCSM SFKWAWARTE  1500
HIRVHTGERP YKCKVEGCGL SFRFVSDYSR HRRKTGHYID QPV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1351	1357	KRRKRKR
2	1352	1357	RRKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein