PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022134274.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 323aa    MW: 36795.1 Da    PI: 7.0173
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022134274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.73.4e-12187212126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     y   +C+++ +tG+C yGd CkF+H+
  XP_022134274.1 187 YQPDICKDYKETGYCGYGDACKFMHD 212
                     67789********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MTDTGENQQP EQVCSFFKKP TKNKNIRKRT IDEDEEEDSK TETSLLLNQK KALKTESKLY  60
FSSGPSKSSL SNESNVESDK PIFQFESSKE IQVHHDSKAT ATLETETEFS RDARAIRERV  120
LKQADEALKG KGKSSGDEKK LYKGVNAYVD YKAGFRREQT ISSEKAGGAH GPLRASAHIR  180
ASARFDYQPD ICKDYKETGY CGYGDACKFM HDRGDYKSGW QLEKEWEEVE KARKRKLAMG  240
SDEGDEDTAE QSDEDEEDAL PFACFICREP FVDPVMTKCK HYFCEHCALK HHAKNKKCFV  300
CNQPTLGIFN TAHEIRKKMA QSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.11e-164C3H family protein