PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022134071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | LBD | ||||||||
Protein Properties | Length: 217aa MW: 23307.6 Da PI: 8.5852 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 131.5 | 3.5e-41 | 30 | 129 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+Ca++C+++pyf ++p+kfa vhk+FGasnv k+l ++pe++r da++slvyeA+ r+rdPvyG++g i++lq+ql++l+a+l+ XP_022134071.1 30 PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLN 124 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_022134071.1 125 SIRSE 129 99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MKRETEVLCS GNNYRHILSS NGGRLNTITP CAACKLLRRR CAQECPFSPY FSPHEPHKFA 60 SVHKVFGASN VAKMLMEVPE SQRADAANSL VYEANLRLRD PVYGCMGAIS ALQHQLQTLQ 120 ADLNSIRSEI LKYKYRDAII PSSSSSPHIA LISGAAGVVV STTATPPAAP PTPPHSQPPP 180 LSLPPPPPSS SAIYSSPISS AAPEFNTISA EHISYFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30340.1 | 1e-71 | LBD family protein |