PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134024.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 558aa MW: 62190.7 Da PI: 4.2949

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.5e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yL++kv+gk++++ e i+ +diyk+ePwdLp+ k+k+++ ewyfFs+ dkky +++r+nrat++gyWk+tgkd++v XP_022134024.1 9 LAPGFRFHPTDEELVRYYLRRKVSGKSVRF-EPISVTDIYKSEPWDLPEksKLKTRDLEWYFFSPLDKKYGNSSRTNRATEKGYWKTTGKDRPVR 102 579**********************999.89**********95246777777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_022134024.1 103 H-NSRVVGMKKTLVYHSGRAPRGDRSNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MGRGSAASLA PGFRFHPTDE ELVRYYLRRK VSGKSVRFEP ISVTDIYKSE PWDLPEKSKL 60 KTRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR 120 APRGDRSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE 180 DDEELIVMPG EEVVANEGLV DDDIHFGVDD IAQYLDEGLP FEYAQLPSNY PEDTSNHVDL 240 PDVLVESDTK PEVCVGDTLE LQHNHGFFQL PEQCGMGGNA ESSDNFAESS DNYKHEDVDY 300 LLDEPYPSVP DDLALNEELF LEANDLSNPV ETDPIGFDVL EEYLTFFDAD DDNLQLSFDP 360 SEILGSEDPI SGQAIPEEKA NGVAENEFVA IKQTSVASGN DASTSKQKPE ATTETGLDSR 420 SSFLKRASYL LGDIPAPPAF ASEYPSKDTA IQQNSAAPTS SSVHLTAGMI QIRSLTSSED 480 LANSLALYRK YAEVNQTHFL GGLQGVNDDI IRQTPIFVAV SQKNGNTGSR GSFLFFFLLF 540 WVLILSVSYK VGSCIYSH

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MGRGSAASLA PGFRFHPTDE ELVRYYLRRK VSGKSVRFEP ISVTDIYKSE PWDLPEKSKL  60
KTRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRHNSRVVGM KKTLVYHSGR  120
APRGDRSNWV MHEYRLTDED LEKAGVVQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE  180
DDEELIVMPG EEVVANEGLV DDDIHFGVDD IAQYLDEGLP FEYAQLPSNY PEDTSNHVDL  240
PDVLVESDTK PEVCVGDTLE LQHNHGFFQL PEQCGMGGNA ESSDNFAESS DNYKHEDVDY  300
LLDEPYPSVP DDLALNEELF LEANDLSNPV ETDPIGFDVL EEYLTFFDAD DDNLQLSFDP  360
SEILGSEDPI SGQAIPEEKA NGVAENEFVA IKQTSVASGN DASTSKQKPE ATTETGLDSR  420
SSFLKRASYL LGDIPAPPAF ASEYPSKDTA IQQNSAAPTS SSVHLTAGMI QIRSLTSSED  480
LANSLALYRK YAEVNQTHFL GGLQGVNDDI IRQTPIFVAV SQKNGNTGSR GSFLFFFLLF  540
WVLILSVSYK VGSCIYSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-130	NAC family protein