PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133837.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 1414aa MW: 155617 Da PI: 8.1783

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.8	5.8e-09	977	1017	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E l+++av+ +G++ ++ I+ ++g +++ qck ++ XP_022133837.1 977 YWTDGEKSLFIEAVRAYGKN-FSMISTHVG-TKSTDQCKIFFS 1017 5***************99.*****.******8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 1414 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDEYG HGYGPSMSFS NKMLENVSSR PSVSHGDGKY ARNGRENRSF SQREWKGHSW 120 ATSNGSTNNC GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDVNGLGT 180 NQRRDREYSV SSSGWKPLKW TRGGGLSSRT STSGHSSSTK SIDALDSNET KSETVLKNES 240 QNLSPSADPA ECAMSSMPCD ETTVRKKPRL GWGEGLAKYE KKKVEVPDGT AFTNVNAEST 300 HSLNSSLIEK GPRGSGFSDC TSPATPSSVV CGSSPGGDEK SSGKAASDND VSNMHGSPGS 360 GFQNQCEEPS FNLEKLDNFS IDDLGSPLIQ LLQSNDSISV DPGIMSCTAM SKLLIYKNEI 420 SKVLETTESE IDLLENELKR LRSESKGSFS FPLASSSLMT GDKNFEEHSD FSNMIPPAAT 480 LPVVTSENNI SKKTLLSTSD SEEVHTDVNE KAVGRFGRSD AMESVITGEK LTISGCSVRD 540 NVVPSVDNSI LIKREAVTLE PISSDINESD DGGDSLFNLI LASNKESACR ASEALISMLP 600 ANEHKIDIWS TNVSCSQNQC LMRERYAKKK RLLRFKERVI TLKYRAYQSL WKESLHVPPV 660 RKLRAKSQKK YQLSLWTNYS GYQKNRSSIR VRIPSSAGNP NPVSNTAILR HVSKQLSNSL 720 VKQYRRTLKM PALVLDQKGK MASRFVSNNG LVEDPCAVEK ERMMINPWTS EEKDVFMEKL 780 ACFGKDFGKI ATFLDHKTTA DCIEFYYKNH KSDCFEKTKK LEFGKKAKSS TSTYLVTTGK 840 KWNPETNAAS LELLGAASAM TACAHKYSSS RSSGRTAYHT TQCDDGLSER AKSFHMFGNE 900 REKVAADVLA GICGSLSSEA MGSCITSNFD RRDGSQDLKC KKGATTVLRR RMTANIPRFI 960 DDEIFSDESC GEMDPSYWTD GEKSLFIEAV RAYGKNFSMI STHVGTKSTD QCKIFFSKAR 1020 KCLGLDLICT AKKMPPDSDD KAKGHECDAN GGCHEAGSRM VEDLPKFVTS INGGEAESMN 1080 RQSAHQEVKE SNPSSKICPS NIAGNAVVSD ACNKKDSSDS AFDDNCQSMN SANDKKDLVR 1140 NQHHAVVSMA ADEIAKEQGA SAPTTTSVGF GNAAIDNYGV PNLKVFSTSK VSDPGTKEQL 1200 ERGNVDTSKD RREKVDSHAV DSSSTPINSR VNSLPKHGQG YHHVRVHSRS LSDSEPSSRN 1260 GDVRLFGQIL SHPSSSPNSK SGTSENGNHR TQLHKFKRRL KVGSHGNLSA AKFNQEDAPS 1320 RSYGIWDGNR LRTGLSSLPD PTNLLSSYPT FNHYSRSASS PISKEQKSNG YSQMSEVSSG 1380 KEAVGGIMVG ENCNEDDECN NAEQRVVVAH RREI

Sequence ? help Back to Top

Protein Sequence Length: 1414 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDEYG HGYGPSMSFS NKMLENVSSR PSVSHGDGKY ARNGRENRSF SQREWKGHSW  120
ATSNGSTNNC GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDVNGLGT  180
NQRRDREYSV SSSGWKPLKW TRGGGLSSRT STSGHSSSTK SIDALDSNET KSETVLKNES  240
QNLSPSADPA ECAMSSMPCD ETTVRKKPRL GWGEGLAKYE KKKVEVPDGT AFTNVNAEST  300
HSLNSSLIEK GPRGSGFSDC TSPATPSSVV CGSSPGGDEK SSGKAASDND VSNMHGSPGS  360
GFQNQCEEPS FNLEKLDNFS IDDLGSPLIQ LLQSNDSISV DPGIMSCTAM SKLLIYKNEI  420
SKVLETTESE IDLLENELKR LRSESKGSFS FPLASSSLMT GDKNFEEHSD FSNMIPPAAT  480
LPVVTSENNI SKKTLLSTSD SEEVHTDVNE KAVGRFGRSD AMESVITGEK LTISGCSVRD  540
NVVPSVDNSI LIKREAVTLE PISSDINESD DGGDSLFNLI LASNKESACR ASEALISMLP  600
ANEHKIDIWS TNVSCSQNQC LMRERYAKKK RLLRFKERVI TLKYRAYQSL WKESLHVPPV  660
RKLRAKSQKK YQLSLWTNYS GYQKNRSSIR VRIPSSAGNP NPVSNTAILR HVSKQLSNSL  720
VKQYRRTLKM PALVLDQKGK MASRFVSNNG LVEDPCAVEK ERMMINPWTS EEKDVFMEKL  780
ACFGKDFGKI ATFLDHKTTA DCIEFYYKNH KSDCFEKTKK LEFGKKAKSS TSTYLVTTGK  840
KWNPETNAAS LELLGAASAM TACAHKYSSS RSSGRTAYHT TQCDDGLSER AKSFHMFGNE  900
REKVAADVLA GICGSLSSEA MGSCITSNFD RRDGSQDLKC KKGATTVLRR RMTANIPRFI  960
DDEIFSDESC GEMDPSYWTD GEKSLFIEAV RAYGKNFSMI STHVGTKSTD QCKIFFSKAR  1020
KCLGLDLICT AKKMPPDSDD KAKGHECDAN GGCHEAGSRM VEDLPKFVTS INGGEAESMN  1080
RQSAHQEVKE SNPSSKICPS NIAGNAVVSD ACNKKDSSDS AFDDNCQSMN SANDKKDLVR  1140
NQHHAVVSMA ADEIAKEQGA SAPTTTSVGF GNAAIDNYGV PNLKVFSTSK VSDPGTKEQL  1200
ERGNVDTSKD RREKVDSHAV DSSSTPINSR VNSLPKHGQG YHHVRVHSRS LSDSEPSSRN  1260
GDVRLFGQIL SHPSSSPNSK SGTSENGNHR TQLHKFKRRL KVGSHGNLSA AKFNQEDAPS  1320
RSYGIWDGNR LRTGLSSLPD PTNLLSSYPT FNHYSRSASS PISKEQKSNG YSQMSEVSSG  1380
KEAVGGIMVG ENCNEDDECN NAEQRVVVAH RREI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-129	MYB family protein